| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0888 |
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| Symbol | |
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| ID | 5137138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 903224 |
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| End bp | 903772 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532346 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216834 |
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| Protein GI | 147673878 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000101636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAAACAA CACGTCGAGA TTTCTTAAAA CTGACTGCGG GCGGATTAAT TTTAGCCGCC
TGTACGCCCA GCATCGCGTT CGCGAGTTAT GCCGCCAAGC CAAGAGAATT GGCATTAAGC
AACTTACATA CAGGCGAAAG CATTGAAACG CGCTATTTTA ATGGCAAAAA TTACGTTCGT
TCTGAATTGA AACGGCTGAA TCATTTATGC CGTGATTTTC GTCGTGACGA AGTGCATGCC
ATGGATAAGT TGCTGTTTGA TCAACTGTGC CAAATCCAAT TGCTACTTGG CACTCAAGCC
GAGGTGCATA TTGTCTCTGG TTACCGCTCT CCCGCGACCA ACAAGCAGCT ACGCAGTAAA
TCAAAAGGCG TGGCGAAGAA AAGTTACCAC ATGTCTGGGC AGGCCATCGA TTTCCGTTTG
GATGGTGTGT CGCTAAAGAA AATCCGTGAA GCGGCGATCA GTTTGCAAGC GGGCGGTGTT
GGTTACTATC CGAAAAGCCA ATTTATCCAC ATTGATACCG GCCCTGTACG CCAATGGGTC
GGTGCCTAA
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| Protein sequence | MQTTRRDFLK LTAGGLILAA CTPSIAFASY AAKPRELALS NLHTGESIET RYFNGKNYVR
SELKRLNHLC RDFRRDEVHA MDKLLFDQLC QIQLLLGTQA EVHIVSGYRS PATNKQLRSK
SKGVAKKSYH MSGQAIDFRL DGVSLKKIRE AAISLQAGGV GYYPKSQFIH IDTGPVRQWV
GA
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