| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0877 |
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| Symbol | gyrA |
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| ID | 5137460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 888677 |
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| End bp | 891361 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532335 |
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| Product | DNA gyrase, subunit A |
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| Protein accession | YP_001216823 |
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| Protein GI | 147673690 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000517937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC TAGCTAAAGA GATCACGCCC GTAAACATCG AAGACGAGCT ACGCAGTTCG
TATTTGGACT ACGCGATGTC GGTTATCGTG GGTCGTGCTC TTCCTGATGT GCGTGATGGC
CTTAAACCAG TACACCGACG CGTACTGTTC GCGATGAATG TGCTGGGCAA CGACTGGAAC
AAAGCCTATA AAAAATCTGC CCGTGTGGTA GGTGACGTAA TCGGTAAATA TCACCCTCAT
GGTGACAGTG CGGTTTACGA CACCATCGTG CGTATGGCGC AGCCTTTCTC ACTTCGTTAC
ATGTTGGTCG ATGGCCAAGG TAACTTTGGC TCGATCGACG GCGACTCCGC GGCGGCAATG
CGTTATACCG AAGTTCGTAT GTCGAAAATC GCGCACGAAC TCTTGGCAGA CCTAGACAAA
GAAACCGTTG ACTACGTTCC GAACTATGAC GGCACCGAGC AGATCCCTGC GGTATTGCCG
ACAAAGATCC CGAACCTGCT GATCAACGGC GCATCTGGTA TTGCGGTGGG TATGGCAACC
AACATTCCTC CGCACAATTT AGGTGAAGTG ATCGATGGCT GTTTAGCCTA CATCGATAAT
GAAGCGATCA CCATTGATGA GTTGATGGAC TACATTCCTG GTCCAGATTT CCCAACCGCC
GCGCTGATCA GTGGCCGTAA AGGCATCATT GACGCGTACA AAACCGGCCG CGGCAAGGTT
TACATGCGCT CGAAAGCGGA AATCGAAACC GATAAGAACG GCAAAGAAAC CATTATCGTC
AGCGAAATCC CTTATCAAGT GAACAAAGCG CGCTTGATCG AAAAAATCGC TGAGTTGGTG
AAAGAGAAAA AAGTCGAAGG GATCAGTGCA CTGCGTGACG AGTCTGACAA AGACGGTATG
CGCATTGTGA TTGAGTGTAA GCGTGATGCG GTTGGCGAAG TGGTTTTGAA CAACCTGTAT
GCCAACACTC AGCTGCAAAC CACCTTCGGT ATCAACATGG TGGCACTCGA TAACGGTCAG
CCTAAGCTGT TTAACCTGAA AGAGATGCTG AAGTGTTTCG TCGACCACCG CCGCGAAGTG
GTGACTCGTC GTACTATTTT TGAACTGCGT AAAGCGCGTG AGCGTGCCCA CATCCTTGAA
GGTTTGGCAC TGGCTCTGGC TAACATTGAT GAAATCATTG AACTGATCCG CCGTGCCGCC
ACGCCTGCAG AAGCAAAAGA AGGCTTAATT GCCCGTGGTT GGGATCTTGG CAACGTTGCG
GCAATGCTTG AGCGTGCAGG TACGGATGCG GCGCGTCCTG AGTGGCTTGA GCCACAATAC
GGCATCCGCG ATGGCAAGTA CTTCCTGACT GAGCAACAAG CGCAAGCGAT TCTGGATCTG
CGTCTGCACA AGCTGACTGG TCTAGAGCAC GAGAAGATCC TCGATGAGTA CAAGCAGCTT
CTCGAAGAAA TCGCGGCATT GATGCACATT CTGGCGAGCA CAGAGCGCTT GATGGAAGTG
ATCCGTGAAG AGCTAGAAGC GATTCGCGCT GGCTTTAGCG ATGCGCGCCG CACTGAAATC
ACGGCAGCAA CGCACGACAT CGACATGGAA GAGCTGATCG CTCGTGAAGA TGTGGTTGTG
ACTCTGTCAC ACGAAGGTTA TGTGAAGTAT CAATTACTGA GCGACTACGA AGCACAGCGT
CGTGGTGGTA AAGGTAAGAG CGCAACCAAG ATGAAAGAAG AGGACTACAT TGAGCGTCTT
CTGGTTGCCA ATACTCACGA TAACATTCTG CTGTTCTCGA CTCGCGGCAA AACTTACCGT
ATGAAGGTAT ACCAACTGCC GCTCGCCAGC CGTACTGCGC GTGGTAAGCC AATCGTGAAC
CTGCTTCCTC TGGAAGAAAA CGAGCGCATC ACCGCGATTC TGCCAGTGAC TGAGTTTAGT
GAAGATAAAT TCATCTTCAT GGCAACCGGT GACGGTACTG TGAAGAAAAC ATCGCTGGAT
CAGTTTGCCA ACGTTCGTGC GAATGGTTTG ATTGCGCTCA ACCTGCGTGA CGAAGACTCG
CTGATTGGTG TGGATATCAC CGATGGCGAA AGCGAAATTA TGCTGTTCTC TAAATTCGGT
AAAGTGGTTC GCTTTAAAGA GTCCGAAGAA ACCGCGGTTG TGGATGAAAA TGGTCAACCT
GTGCTGGATG AAAATGGCCA GCCAGAGATC AAGTTCAAAG GCGTAAGACC AATGGGTCGT
ACCGCTGCGG GTGTTCGCGG CATGAAACTG GCTGATGGCG ACCAAGTGGT ATCGCTCATC
GTGCCGAAGA CCGAAGGTGA CGTACTCACC GTAACTGAAA ATGGTTACGG CAAACGTACC
AGCCTATCTG AATACCCAAC CAAAGGTCGT GGAACTCAGG GTGTGGTTTC GATCAAAGTC
TCTGAGCGTA ACGGCAGCGT TGTGGGTGCA GTACAAGTGG CCGAGGGTGA TGAGTTCATG
ATGATCACCA ATGCCGGTAC ACTGGTACGT ACTCGCGTGG CGGAAGTGAG CCAAGTGGGC
CGTAATACTC AAGGCGTGAC CCTGATCCGT ACTTCGGAAG GTGAAAGTGT GGTAGGTCTG
CAGCGTATCG ATGAAATCGA AGAGTCGGAA TTGCCAGAAG GTGAGGAAGC ACTTGTCGAG
AACGATGCAC CTGTTGCACA AGATGATGAT GGTGAACAAG AGTAA
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| Protein sequence | MSDLAKEITP VNIEDELRSS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNVLGNDWN
KAYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEVRMSKI AHELLADLDK ETVDYVPNYD GTEQIPAVLP TKIPNLLING ASGIAVGMAT
NIPPHNLGEV IDGCLAYIDN EAITIDELMD YIPGPDFPTA ALISGRKGII DAYKTGRGKV
YMRSKAEIET DKNGKETIIV SEIPYQVNKA RLIEKIAELV KEKKVEGISA LRDESDKDGM
RIVIECKRDA VGEVVLNNLY ANTQLQTTFG INMVALDNGQ PKLFNLKEML KCFVDHRREV
VTRRTIFELR KARERAHILE GLALALANID EIIELIRRAA TPAEAKEGLI ARGWDLGNVA
AMLERAGTDA ARPEWLEPQY GIRDGKYFLT EQQAQAILDL RLHKLTGLEH EKILDEYKQL
LEEIAALMHI LASTERLMEV IREELEAIRA GFSDARRTEI TAATHDIDME ELIAREDVVV
TLSHEGYVKY QLLSDYEAQR RGGKGKSATK MKEEDYIERL LVANTHDNIL LFSTRGKTYR
MKVYQLPLAS RTARGKPIVN LLPLEENERI TAILPVTEFS EDKFIFMATG DGTVKKTSLD
QFANVRANGL IALNLRDEDS LIGVDITDGE SEIMLFSKFG KVVRFKESEE TAVVDENGQP
VLDENGQPEI KFKGVRPMGR TAAGVRGMKL ADGDQVVSLI VPKTEGDVLT VTENGYGKRT
SLSEYPTKGR GTQGVVSIKV SERNGSVVGA VQVAEGDEFM MITNAGTLVR TRVAEVSQVG
RNTQGVTLIR TSEGESVVGL QRIDEIEESE LPEGEEALVE NDAPVAQDDD GEQE
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