| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0874 |
|---|
| Symbol | nrdB |
|---|
| ID | 5135349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 883625 |
|---|
| End bp | 884794 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640532332 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_001216820 |
|---|
| Protein GI | 147674333 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0530209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTAGGC AAGAGGCCAA ACGGATGAAG GCAACAATGG CTTACAGTAC TTTTACCCAA
AAGAAGAATG ACCAACTTAA AGAACCTATG TTCCTTGGTC AGCCTGTCAA CGTCGCACGT
TACGACCAAC AAAAATATGA GATTTTTGAG AAGCTGATTG AAAAGCAACT CTCCTTCTTC
TGGCGTCCAG AAGAAGTGGA TGTATCCAGC GATCGAATTG ACTACGGCAA ATTGCCGGAT
CATGAAAAGC ATATTTTCAT TTCTAACCTG AAATACCAAA CTCTGCTCGA CTCCATTCAA
GGCCGTAGCC CGAACGTCGC ACTGCTGCCA CTGGTTTCAC TGCCAGAGCT GGAAACGTGG
ATTGAAACTT GGTCTTTCTC TGAAACCATT CACTCACGCT CTTACACTCA CATCATTCGT
AATATCGTGA ATGATCCTGC AGTGGTGTTT GACGACATCG TTGAAAACGA GCACATCATC
AAGCGTGCGA AAGACATCGC CCACTACTAC GATGATTTGA TTGAGCTGAC TAATGACTAT
CACCGCTATG GTGAAGGCCA ACATCAGATC AACGGTGAAA CCATCACGGT ATCGCTGAAA
GAGCTGAAGA AGAAGCTGTA TCTCTGCTTG ATGTCAGTCA ATGCACTGGA GGCGATTCGC
TTCTATGTAA GCTTTGCCTG CTCTTTCGCG TTTGCAGAAC GTGAACTGAT GGAAGGTAAC
GCGAAAATCA TCAAACTGAT TGCACGTGAC GAAGCCTTGC ACCTGACGGG TACTCAACAC
ATGTTGAATC TACTGCGCAA CGGCATGGAT GATTTTACCT TCCTGCAAGT GGCAGAAGAG
TGTAAGCAAG AAAGCTTCGA TTTGTTCAAA GAAGCCGCTG AACAAGAGAA AGAGTGGGCA
GAATACCTGT TCAAAGACGG TTCGATGATC GGCCTTAATA AAGATATTCT GTGTCAGTAC
GTCGAGTACA TTACCAATAT CCGTATGCAA GCCGTCGGTT TAGAGCCGGC ATACCCAGCC
GCGACGAATA ACCCGATCCC ATGGATCAAC GCATGGCTGT CTTCTGATAA CGTGCAAGTG
GCACCTCAAG AGGCTGAGAT CAGTTCTTAC TTAGTGGGTC AAATCGACAA CGAGGTAAGC
GCCGATGATT TCGAGGGCTT TGAACTGTAA
|
|---|
| Protein sequence | MLRQEAKRMK ATMAYSTFTQ KKNDQLKEPM FLGQPVNVAR YDQQKYEIFE KLIEKQLSFF
WRPEEVDVSS DRIDYGKLPD HEKHIFISNL KYQTLLDSIQ GRSPNVALLP LVSLPELETW
IETWSFSETI HSRSYTHIIR NIVNDPAVVF DDIVENEHII KRAKDIAHYY DDLIELTNDY
HRYGEGQHQI NGETITVSLK ELKKKLYLCL MSVNALEAIR FYVSFACSFA FAERELMEGN
AKIIKLIARD EALHLTGTQH MLNLLRNGMD DFTFLQVAEE CKQESFDLFK EAAEQEKEWA
EYLFKDGSMI GLNKDILCQY VEYITNIRMQ AVGLEPAYPA ATNNPIPWIN AWLSSDNVQV
APQEAEISSY LVGQIDNEVS ADDFEGFEL
|
|---|
| |