| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0870 |
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| Symbol | |
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| ID | 5136418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 880335 |
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| End bp | 881234 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532328 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216816 |
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| Protein GI | 147674372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000878798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCAAGA AAAACATCAC CTCAATGATG TTGTTGACAT TTTCCGCCTG CGTAAGTGCA
CAGCAACAAG ATGTGAACTT CAAATCTGAT TTTACCTATC CATTGAGCTG TGAACAGAAC
GGCTGCTATT CAAGCAATTA TTATACCGAC TCTGTTGGTA ACCCTTTTTC TTTGAGTCTC
AATGATGCTT CTTCACTCAA GCTCGATGAA CATCTTCCCA AATATTTAAT GGTGCAAGAC
ACCCGTGACT GGGATTATCT GAAAGGTCAA ACCTATACCA TTCTCGGCCT GAGTGTTATG
ACCGCAGGAT TGATGACTTT ACTCCCTGAA TCCATCACAA AATGGGACGC AGAAGATCGC
AAACTGAGCG GCCTTGGTAA AAAGTGGAAA GATAATGTTA CCTCAGGCCC AACTTGGGAT
CGTGACGAAC ATTTTCTGAA CTACATTATG CACCCATACT TTGGTGGTGT TTATTACACG
GCGGCGCGTC ATGCAGGATT CAACGAGTTC GAATCCTTCC TCTACTCGGC CACCATGTCG
ACGTTCTTCT GGGAATATGG GGTTGAAGCT TTCGCAGAAG TCCCCTCGTG GCAAGATATT
TTCATCACCC CGTTTTTTGG TGCTGTGATC GGTGAACTGA TGTTTGAAGC CGAACAAAAT
ATTGTGGCGA ATGGGGGTGA AGTCATGGGC TCCGATACTA TGGGTGGCGT GACTCTCTTC
TTCCTCAACC CAATCGGTCA TATTCATGGC TGGGTCAGCA GTGCTTGGGG AGGCTCTGCG
GATGTTTCCT TCCAAAGCAG CCCTTGGTCA AACAACCCAG ATGCAGCCAA ATATGCGTTG
GATGCAGGTG CTCCATACGA TTCACAGTAT TACGGCGTCA ATTTTAAAAT CACCTTCTAA
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| Protein sequence | MLKKNITSMM LLTFSACVSA QQQDVNFKSD FTYPLSCEQN GCYSSNYYTD SVGNPFSLSL
NDASSLKLDE HLPKYLMVQD TRDWDYLKGQ TYTILGLSVM TAGLMTLLPE SITKWDAEDR
KLSGLGKKWK DNVTSGPTWD RDEHFLNYIM HPYFGGVYYT AARHAGFNEF ESFLYSATMS
TFFWEYGVEA FAEVPSWQDI FITPFFGAVI GELMFEAEQN IVANGGEVMG SDTMGGVTLF
FLNPIGHIHG WVSSAWGGSA DVSFQSSPWS NNPDAAKYAL DAGAPYDSQY YGVNFKITF
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