| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0865 |
|---|
| Symbol | |
|---|
| ID | 5137132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 875379 |
|---|
| End bp | 876134 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640532323 |
|---|
| Product | vitamin B12-transporter ATPase |
|---|
| Protein accession | YP_001216811 |
|---|
| Protein GI | 147674550 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4138] ABC-type cobalamin transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.232587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTG TTAACAGCTT ACAGGTGGAT TCTCGTCTGC TGCCGTTGTC ATTACAGGCT
AACGCTGGCG AAGTTTGGCA TGTGATTGGC CCCAACGGCT GTGGCAAAAG CACCTTGCTT
GCCGCTTTAG CGGGGATGAT CCCTTTCTCT GGATCTGTGC AGGTTGGTGG CTTAAACGTG
AGTCAAGCAA GCTTATCTGA ACTCGCCCGC CATCGCGCTT ATCTGGCACA AAATGATAAA
CCCAGCTTTC AACTGCACGT TTTCCAATAT TTGGCGCTGT CGGTTCCTGC GAACGTAGCC
CTAGAACGCT CGGAAGTGGC CAGCGAAATC GATCAGATCA GCCGTTTACT CAATATTGAT
GACAAACTAC ACCGTTCGAT TCACCAGCTT TCTGGTGGTG AATGGCAGCG TGTGCGTCTA
GCCGGAAGTT GTCTACAGGT CTCACCGGTT TTGAATCCTT CTGCGCGTTT ACTGATTTGG
GATGAGCCAG CGGCACCCTT GGATATTGCG CAAGAAAGCC TGTTGTATCG TCTGATTGAG
CGTATGGCAG GGCAGGGATT AACGGTGATC ATGGCCAATC ATGACTTGAA CCGCACTTTG
CGTCACGCTG ATCAAGTGTT ACTGCTCAGT CGTGGCGTTC TATACCGTGC TGGAAGTGCG
AAAGAGGTAC TGACTCAAGA AGTGCTGCAA TCCGTGTTTG GCACGTCAAT TCGCCGAGTG
GAACTGGAAG GGCATCCTCA CTTGCTGTTC GATTGA
|
|---|
| Protein sequence | MIRVNSLQVD SRLLPLSLQA NAGEVWHVIG PNGCGKSTLL AALAGMIPFS GSVQVGGLNV
SQASLSELAR HRAYLAQNDK PSFQLHVFQY LALSVPANVA LERSEVASEI DQISRLLNID
DKLHRSIHQL SGGEWQRVRL AGSCLQVSPV LNPSARLLIW DEPAAPLDIA QESLLYRLIE
RMAGQGLTVI MANHDLNRTL RHADQVLLLS RGVLYRAGSA KEVLTQEVLQ SVFGTSIRRV
ELEGHPHLLF D
|
|---|
| |