Gene VC0395_A0859 details

Gene Information

• Locus tag: VC0395_A0859
• Symbol: cobT
• ID: 5136572
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 869921
• End bp: 871030
• Gene Length: 1110 bp
• Protein Length: 369 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640532317
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_001216805
• Protein GI: 147673919
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGCTT TTGCTTTGTT GTTCAGAGCG AGTAGACTGT GCCGCATTTG TTTTCATGCC 
TTAAAAAGAA GTAAGGATGC CCGCATGTTA GATCGCTCAT TCAGCGCCGA AATCCAACAA 
CGAATCGATC AAAAAACCAA GCCACTCGGG GCGCTAGGGC AACTTGAGCG CGTCGCGCAT 
CATTTAGCAC TCATCCAAAG CCAAAACCAA GATCAAGCGG TAACTCAACT GGCGATTCAT 
CAGCCGACCG TTTTGGTTTT TGCCGCCGAT CACGGCATCG CTGCGCAAGG TGTCAGTATT 
GCGCCAAGCG CAGTGACTGA GCAAATGGTG CAAAACTTTC TCGCGGGCGG CGCGGCCATC 
AACTGTTTTT GTCGTACTGA ACACGCCGCG ATGCGGGTGA TTGACTGCGG TATTTTGCGA 
GCTCAGCCCG CTCACGCGGA TTTGATTGAG CAGCGTCTCG GTGCGGGCAC GCATAATTTG 
GCCGAGCAAG CCGCCATGTC TTCAGAGCAG GTGCAAGAGG GAATCGCACT TGGCAAGGCG 
TTGATTCATC GTGAAGTTGA GTCGGGCTGT AATCTATTGA TGTTTGGTGA GATGGGCATT 
GGCAATACCA GCAGTGCAGC AGCAATCTTG GCGGCACTCT CCGGCTTGCC GATTGAAGTG 
TGTGTTGGAC GTGGCACCGG CATTACGGAT GAGCAGTACC AACGTAAACG AGCGTTGGTT 
ACCCAAGGTG TTGAGCGCTG TTTAGGCGCT GCGCCACAAG ATGTCTTGCA GCAAGTTGGC 
GGGTTTGAAA TTGTCCAAAT GGTCGGGGCA TTTATGGGGG CATACGAAAA GCAAACCCCA 
GTGCTGGTGG ACGGTTTTAT TGTGACGGTT GCCGCTTATG TTGCGACCTT AATCGAGCCA 
AATGTACGAG ACTTTTTGCT GTTTGCCCAC TGCTCACAAG AAACGGGGCA CCGCGCAGTA 
TTAGAAATGC TGGCCGCAGA GCCACTGTTG GATTTAGGTT TACGTTTAGG TGAAGGTACC 
GGAGCTGTGT TGGCGCTGGG TCTTGTTCGT GCTGCAGTGG AGTTTTACAA CCACATGGCC 
AGTTTTGCTG ATGCAGGAGT CACAGTGTAA 

 

Protein sequence

MKAFALLFRA SRLCRICFHA LKRSKDARML DRSFSAEIQQ RIDQKTKPLG ALGQLERVAH 
HLALIQSQNQ DQAVTQLAIH QPTVLVFAAD HGIAAQGVSI APSAVTEQMV QNFLAGGAAI 
NCFCRTEHAA MRVIDCGILR AQPAHADLIE QRLGAGTHNL AEQAAMSSEQ VQEGIALGKA 
LIHREVESGC NLLMFGEMGI GNTSSAAAIL AALSGLPIEV CVGRGTGITD EQYQRKRALV 
TQGVERCLGA APQDVLQQVG GFEIVQMVGA FMGAYEKQTP VLVDGFIVTV AAYVATLIEP 
NVRDFLLFAH CSQETGHRAV LEMLAAEPLL DLGLRLGEGT GAVLALGLVR AAVEFYNHMA 
SFADAGVTV