| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0841 |
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| Symbol | |
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| ID | 5137021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 853019 |
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| End bp | 854137 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532298 |
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| Product | GGDEF family protein |
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| Protein accession | YP_001216786 |
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| Protein GI | 147674755 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR02481] hemerythrin-like metal-binding domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000214515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAT TCAAATGGGA TCAATACTTC GAAACAGGAT TGGAGGAGGT TGATGAGCAG
CATCAATCTC TCGTCAATAT CGTCAACCGC TACAGCTCTC TTTTGGCCGA AAATCATGTG
TCACTAGATG AGATCCGTCT CGCTCTGTTT GAGCTTTCTC GTTACTCTGA GTACCACTTC
AAAGAAGAAG AGAAGCTCAT GCGTGAGGTC GGCATTTCAG CACTTCATCT TGAAGAGCAC
ATTCAGGTTC ATCGCACGTT TATGTCTGAA GTGTTTAGCA TGCAAGCTTT CATCCATGAT
GTGGATGACC GCTCGGCCGT TCAGTTATTG GAGTTTTTGA TCCATTGGTT GGCGTACCAC
ATCTTAGGTA TCGATCAGAA TATGGCGCGA CAAGTGATTG CGATTCGCTC AGGCATGAGT
GCCGAAGAGG CCTACGCTAA AGAGGAACGA GAGAAAAATG CCGCGACGGA GCCATTACTC
AATGCCCTTA ATGCGTTATT TGATCAAGTC TCTGAACGTA ATCGAGAACT CGTCAAACTC
AATCAATCAC TGGAAGAAAA AGTGATTGAG CGCACTCAGC AGCTTTACCA AGTCAATCGT
CAGCTCGAAG CGCTATCCAT GACCGACAGT TTGACGGGCT TACCAAACCG CCGTAAAGCC
ATGCGTCAGC TTGTGTTGCA TTGGAATCTT GCGCAAGACA ACCAGCAGCC TTTCGTGTGT
GTCATGATCG ATATTGATGG GTTTAAAGCG GTTAATGATC ATCACGGGCA CGATGTAGGC
GACAAAGTGT TAACCACGAT AGCGAACATG CTAAGAGATC ACTTTCGTAG TGATGATCTG
GTATGTCGCT TAGGTGGCGA CGAGTTTCTA GTGATCTGTC CTGAAACCAA CACTGCTGGT
GGTGTCTATA TTGCAGAGCA GGTTTGCCGT GCGATTCAAC AGCAGGTGAT CTCGCTTGAA
AACAATATTC GTTGGCAAGG CAGTGTCAGT ATGGGGGTTG CCGCGTTTGC CTCAAACATG
AAAGATCACC ATGAGCTGCT GCGCGCGGCG GATCAAGCGG TTTACCTTGC CAAAAACAGC
GGAAAAAATC GTGTTTGCGC TTTTGGTGCG CCGAGCTAG
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| Protein sequence | MQSFKWDQYF ETGLEEVDEQ HQSLVNIVNR YSSLLAENHV SLDEIRLALF ELSRYSEYHF
KEEEKLMREV GISALHLEEH IQVHRTFMSE VFSMQAFIHD VDDRSAVQLL EFLIHWLAYH
ILGIDQNMAR QVIAIRSGMS AEEAYAKEER EKNAATEPLL NALNALFDQV SERNRELVKL
NQSLEEKVIE RTQQLYQVNR QLEALSMTDS LTGLPNRRKA MRQLVLHWNL AQDNQQPFVC
VMIDIDGFKA VNDHHGHDVG DKVLTTIANM LRDHFRSDDL VCRLGGDEFL VICPETNTAG
GVYIAEQVCR AIQQQVISLE NNIRWQGSVS MGVAAFASNM KDHHELLRAA DQAVYLAKNS
GKNRVCAFGA PS
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