| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0832 |
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| Symbol | |
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| ID | 5137042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 844220 |
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| End bp | 846334 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532289 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216781 |
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| Protein GI | 147674946 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0236981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCTCT TTAGCATGCT GAGTTTTAAT AAGTACTTAC CTACGGTGAG AAAAAATGAA
TTAACCAAGG TTTCTCAATA CCTTGTTTCA GCGATGCATT CGATTCGTGA AGGGATGGTG
TGGCTGATCC CGTGCTTAAT GATCTCTTCC TTTGTCCTGT TTATTGCCAG CATGGGCGAG
CTGTTTAGCG GTGGCCGTCC TGAATGGGTT TTGATTTTGT ATCGCGCGAA CCAAGTGATC
GCCGAAACCT TTCCTTATTT GATGACGGCC ACCATCTCAT ATCTGCTGGC CATGCATTGG
CATTTGCCAC GTCCCCCGAT TGCGCTATTG AGCATCATTT ATTTGGTGGT CTCCTCAGCT
TCGGTGAGTG CCGAGAATAA TTTGCCAACG TTTCAAATCA TCACAGCACT GATCACACCG
ATTTATGCTA TTCCGCTGAT AGCTTGGTTG ATGCGTTATC CGGTCTTACA CTTAACCCAC
TCAAACAGTG CTGGCAGCAT AGTACGTGAG TCACTCAATC TGGTGTTGCC TGCGGCACTG
ACGGCCATGG TTGTGGTGGG CATAAATTTA ATTTTATTTG GCCCGATCAC TCGTCAGATC
TTTGCAAGCT TGATGCATTT TGATTATGCC AATGACCCTT ATTCCTTCGG CTTAACATTC
GCCAGCCTAA ACTCGCTGCT TTGGTTTTTC GGCATCCACG GTTATTACGC TTTATTACCT
TTAGTGGAAT TATTGCAAGA AGCGAGTCGG CTGTCCGAGT CCTATTTTTT GATCGGTGAA
ACCGCCCCTT ATCCAATGAA TTTATCTTTT ATGGGCACGT TTGTGTTTAT CGGAGGCAGC
GGTGCAACCT TTTCTTTAGC TTTAGCTATC CTATTGTTCG GAAAACAGAA AAACATTCGC
TTGCTCGCGA TTGCCAGTCT TCCGATCGGG CTGATTAATG TGAATGAGAT TTTCCTATTT
GGTTTGCCTC TGATCCTCAA TCCGCGTTTA TTCTTCCCCT TTCTCCTCGC ACCTATGGTG
AATGTGATGG TATCACTCTG GGCGGTAGAG TCCGGTTGGG TCGCGTACCC GAGTGTTTCA
GTGCCGTTCA ATAGCCCGAT TTTTCTCAAT GCTTGGATTG CGACTAGCGG TGACTGGAAT
GGATTACTCC TGCAATTGGT CAATATTGTT CTCGGTTGTC TCTTATATTT GCCCTCGGTG
CTGCGTCTTA ATGAACAATA TGGTCAGCAA ACGATTCGAA TTCCTTCGTT GGATACTATG
TATACTCGCC GTCAAGAAGA GGCGGCTCAT CTGCAAGATG ATCCCATTGC GTTGGCGCAG
AAACGGGAGC GTGAGCAGCT TAAAGTTGAA CAGCAACTAC AGATGATGAG CAGCAAAGAG
TTTTGTTTGG AGTATCAACC GCAAGTTTGC CACCGAACAG GACAAGTGAT TGGTTGTGAG
GCATTAATTC GAGCCAAAGA TCAACAAGAT AACATACTAT CACCGGCAGC CTTTTTACCT
TCCCTTGCCA AAGCAGGGTT GATGAAAGAG ATGGATTTAT GGGTGGTGAA ACACGCTACG
CGTGATGTTC GCAAGCTAAC GGATGTCGGA GTTTATGTAC CTGTCAGTAT TAATCTGACG
GCAGAAACCT TGATGAATTT GACCGTAATG GCTCAGATTG AAGAGATCAT TCGCCCAGTG
GCAGGATTAA TCCATATTGA GCTGACGGAA GAAAGTTTAC TGGCGGATGA ACAGCGTTTG
ACTTGGGTGT TTAATCAACT CCATCAATTA GGTGTCAAAA TTTACATTGA TGATTTTGGT
ACTGGTTACT CTTCTCTCAG CTATCTGCAC CGTTTTGATG TCGATGGGAT CAAGATTGAT
CGCTCTTTCG TGCTAGCTTT GGCCTCTGAA AAAGGGCGCA AAGTGTTTGC GAATTTACAG
CTCGTGGCTC ATTCCCTTGA ATTGGAAACG ATCGTCGAAG GGGTCGAAAC TCAAGAGCAA
TTAGAAGCGA TGGGAGATGA ATACCCTTTC TCAGTACAAG GCTGGTTTTA CAGTAAATCT
CTCACTCGTG AACATTTGGT GGAATTCGTG CAAGAACGTA ATATGCTCAA AACAACCCCA
GCTGAGGTGC AATAA
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| Protein sequence | MSLFSMLSFN KYLPTVRKNE LTKVSQYLVS AMHSIREGMV WLIPCLMISS FVLFIASMGE
LFSGGRPEWV LILYRANQVI AETFPYLMTA TISYLLAMHW HLPRPPIALL SIIYLVVSSA
SVSAENNLPT FQIITALITP IYAIPLIAWL MRYPVLHLTH SNSAGSIVRE SLNLVLPAAL
TAMVVVGINL ILFGPITRQI FASLMHFDYA NDPYSFGLTF ASLNSLLWFF GIHGYYALLP
LVELLQEASR LSESYFLIGE TAPYPMNLSF MGTFVFIGGS GATFSLALAI LLFGKQKNIR
LLAIASLPIG LINVNEIFLF GLPLILNPRL FFPFLLAPMV NVMVSLWAVE SGWVAYPSVS
VPFNSPIFLN AWIATSGDWN GLLLQLVNIV LGCLLYLPSV LRLNEQYGQQ TIRIPSLDTM
YTRRQEEAAH LQDDPIALAQ KREREQLKVE QQLQMMSSKE FCLEYQPQVC HRTGQVIGCE
ALIRAKDQQD NILSPAAFLP SLAKAGLMKE MDLWVVKHAT RDVRKLTDVG VYVPVSINLT
AETLMNLTVM AQIEEIIRPV AGLIHIELTE ESLLADEQRL TWVFNQLHQL GVKIYIDDFG
TGYSSLSYLH RFDVDGIKID RSFVLALASE KGRKVFANLQ LVAHSLELET IVEGVETQEQ
LEAMGDEYPF SVQGWFYSKS LTREHLVEFV QERNMLKTTP AEVQ
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