| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0831 |
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| Symbol | polB |
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| ID | 5135728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 846306 |
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| End bp | 848669 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532290 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001216782 |
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| Protein GI | 147675373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0134615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATTG AACAAGGGTT TGTATTAACG CGTCACGCTC GTGATGTGGC TGGACAAACC
CAAATTGAAC TTTGGCTCGC GACACCTTCA GGCCCAACGC AACTTACCAT ACGCGGTGAG
CGTCCGGTTT TTTTTATTGA ACAATCGGCT AGCCAAGAAG TGATGCGAAT TGCCGCAGAA
TTATCAATAA CGCCCTCATT AGCGCCTCTG TCATTACGTA GCTTTGCAGG CCAACCCCTC
GCCGCTTGTT ACTGCAATAC GATTCGCGAT AGCCAAATCT TAGCCGAGAA ACTCGCTCAA
GCGGACATGT TGATCTTAGA GGCGGATATT CGTTTGGCTG ACCGTTTTCT GATGGAACGC
TTTATCCAAG GCAGCATCGA ATTTACTGGT CAGATCACCG ATTTCGGCCA TTATCGCCAA
GTTCAGCAAG CCAAATGTCG CCAAGGTGAT TACCTACCGA CGCTGAATAT GGTATCGCTA
GACATCGAAT GCTCCGAAAA AGGGCTACTC TACTCGATTG GTTTGGATAG CCCGATGGAC
AGCCGAGTGA TTATGATAGG TCAACCAGAA CCCGCGGAAA CGCCGATTCA ATGGGTCGAG
GATGAATACC AGTTACTCAA AGCGCTCATT GCATGGTTTG AGCAGTTTGA TCCTGATGTG
ATTATTGGTT GGAGTGTAGT GGATTTCGAT TTCCGGCTGC TGCACAAACG CGCGGAGTTC
CACAAACTGA AACTCACTAT TGGACGAGCT CAGCAACCGA GCTTCTTCCG CACGGCGAGC
CAAACTCAGC AAGGCTTTAT CAGTATTCCC GGGCGTGTGG TGCTCGATGG TATCGATACG
TTAAAAACCG CGACTTACCA TTTTCGTTCA TGGTCTTTGG AGTCGGTCTC GCAAGAGCTG
CTCGGCGAAG GGAAAGCGAT CCATAACGTG CATGATCGGA TGGATGAAAT TAACCAGATG
TTTCGCCACG ATAAGCCCTC ACTCGCTCGC TACAACCTGC AAGACTGCGT ATTAGTGAAT
AAGATTTTTG CGGCCACTCA TCTGCTCGAT TTCGCCATTC AGCGTTCACG TTTAACGGGT
GTCGAGTTAG ATCGCATTGG TGGCTCCGTG GCCGCATTCA CCAATCTCTA TCTGCCACAA
CTGCACCGCG CAGGGTATGT CGCTCCCAAT TTGCAGCCAG AAAACTGGGT TGCCAGCCCT
GGCGGTTATG TGATGGACTC GATTCCGGGG CTGTATGACT CGGTACTCGT GCTCGACTTT
AAAAGCCTCT ACCCTTCGAT TATTCGCTCG TTTTTGATTG ATCCGCTTGG ATTGATTGAA
GGATTAAAGC TACCGATAGG CAAACAAGCT GATCACGCGG TTCCGGGCTT TCGCGGTGGT
CAATTTCATC GTACCAAACA CTTTTTGCCT GAGATGATCG AAAAGCTATG GGCAGCGCGC
GATGAAGCCA AACGCAACCA AGAAAAGGCC TTTTCGCAAG CGATCAAAAT CATCATGAAC
TCGTTTTATG GCGTACTCGG ATCATCAGGC TGCCGCTTTT TCGATGCGCG ATTGGCATCG
AGCATTACCA TGCGCGGCCA TGAAATCATG ATCCAAACAA AACGGTTGAT TGAAGCGCGC
GGCTATCAAG TAATTTATGG CGATACCGAT TCAACGTTTG TCGCACTCGG TGGGCAATAC
TCTCAGCAAG AAGCCGACGC GATTGGTAAT GCTTTGGTGA GTGAAATCAA CCAATGGTGG
ACAGAGCATT TAAAGCAAGA ATATGCCCTT GCTTCGATTC TTGAACTCGA ATACGAAACC
CACTATCGCC GTTTTTTAAT GCCGACCATT CGCGGTTCAG AAACGGGCTC CAAAAAACGC
TATGCGGGTT TAAAAGGGGA TGGTGATAAT GAACAACTGA TTTTTAAAGG TTTGGAAAGC
GCACGCACCG ATTGGACGCC GCTCGCGCAA CGGTTTCAAC ATCAGCTGTA TCAATTGATT
TTCCACGGCC AAGACCCAGA ATCCTATATT CGCACTATTG TAGAACAGAC ATTGGCAGGC
CAATTGGATG AACAATTGGT GTATCAAAAG CGTTTACGCC GACGGTTACA TGAGTACCAA
AAGAATGTGC CGCCGCAAGT ACGCGCAGCC AGAATGGCGG ATGACATTAA TGCCAAACTC
GGGCGGCCTC TACAGTATCA GTATCGCGGC AGCATTGAAT ATTTGATCAC CGTGAATGGA
CCAGAGCCGA AAGAGTATTC CAAAAGTCCG ATGGATTATC AGCACTACAT CGACAAGCAA
CTCAAACCGG TGGCAGACGC GATTTTGCCT TTCATCGGCA AGCAATTTGA CGAGCTTATT
GCACCTCAGC TGGGGTTGTT TTGA
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| Protein sequence | MKIEQGFVLT RHARDVAGQT QIELWLATPS GPTQLTIRGE RPVFFIEQSA SQEVMRIAAE
LSITPSLAPL SLRSFAGQPL AACYCNTIRD SQILAEKLAQ ADMLILEADI RLADRFLMER
FIQGSIEFTG QITDFGHYRQ VQQAKCRQGD YLPTLNMVSL DIECSEKGLL YSIGLDSPMD
SRVIMIGQPE PAETPIQWVE DEYQLLKALI AWFEQFDPDV IIGWSVVDFD FRLLHKRAEF
HKLKLTIGRA QQPSFFRTAS QTQQGFISIP GRVVLDGIDT LKTATYHFRS WSLESVSQEL
LGEGKAIHNV HDRMDEINQM FRHDKPSLAR YNLQDCVLVN KIFAATHLLD FAIQRSRLTG
VELDRIGGSV AAFTNLYLPQ LHRAGYVAPN LQPENWVASP GGYVMDSIPG LYDSVLVLDF
KSLYPSIIRS FLIDPLGLIE GLKLPIGKQA DHAVPGFRGG QFHRTKHFLP EMIEKLWAAR
DEAKRNQEKA FSQAIKIIMN SFYGVLGSSG CRFFDARLAS SITMRGHEIM IQTKRLIEAR
GYQVIYGDTD STFVALGGQY SQQEADAIGN ALVSEINQWW TEHLKQEYAL ASILELEYET
HYRRFLMPTI RGSETGSKKR YAGLKGDGDN EQLIFKGLES ARTDWTPLAQ RFQHQLYQLI
FHGQDPESYI RTIVEQTLAG QLDEQLVYQK RLRRRLHEYQ KNVPPQVRAA RMADDINAKL
GRPLQYQYRG SIEYLITVNG PEPKEYSKSP MDYQHYIDKQ LKPVADAILP FIGKQFDELI
APQLGLF
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