Gene VC0395_A0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0819 
Symbol 
ID5137211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp831884 
End bp832351 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID640532277 
Producthypothetical protein 
Protein accessionYP_001216769 
Protein GI147673539 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000140938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTATGA AAAACTTAGA ATTAAAGGTT CCTCCAGTCG CGGTTTTTCT GGTGGCCTTG 
GCGCTCATCC ATCTCTCTTC CATCCTCTTT CCAACATTAA CCATTACACT ACCGTGGCCA
AGCCTAGTCA TGGCGCTCTG TTTTTGCAGC TCAGGTTTCT GGGGGATTGC TGGTTTGTTG
GAGTTTCGTC GTTTTAAAAC GACGGTGAAC CCCATGGCTC CGGATCTCGC GGCCACTGTG
GTAGACAGCG GCGTTTTTGC ACTCAGCCGC AATCCTATGT ATCTCGGCTT ACTGCTCCTG
CTGTTTGGGC TTGCTTACTG GCAAGAGAAC GCTCTTAGCT TGGTGATAGT TGGCGGTTTT
TTGCTGTACA TGAATCAATA CCAAATCGAG CCTGAAGAGC GGATTCTAGA AGCCAAGTTT
GGCGAAGCTT ATCTACATTA CAAAAAGCGA GTGAGACGCT GGTTGTAA
 
Protein sequence
MIMKNLELKV PPVAVFLVAL ALIHLSSILF PTLTITLPWP SLVMALCFCS SGFWGIAGLL 
EFRRFKTTVN PMAPDLAATV VDSGVFALSR NPMYLGLLLL LFGLAYWQEN ALSLVIVGGF
LLYMNQYQIE PEERILEAKF GEAYLHYKKR VRRWL