| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0818 |
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| Symbol | |
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| ID | 5135299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 828769 |
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| End bp | 831834 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532276 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216768 |
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| Protein GI | 147675638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.103467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCAGC GTAGTAGGGG CAGGAAGCAA ATGTTACCAA GACTCCATCA CCAATCCGAC
GTTGATCCGG TGGTTTTAAC TTTTTTACAC GAGTTAAAAA CCGCAGGATT TACCGGCGAT
ATTGAAACCC AATACTCCAG CCGTCTTGCG GTAGCGACGG ATAACAGCGT CTACCAACAA
TTGCCTCAAG CGGTCGTACA TCCTAAATCC ACCGCTGATG TTGTTCTTAT AGGAAAGATT
AGTTCAAAAC CAGAATTTGA GAGAGTGACT TTTTCACCTC GTGGTGGCGG TACGGGCACG
AATGGTCAAT CGCTGACTAA AGGGGTGGTC GTTGATTTGT CGCGGCATAT GAATCGTATC
CTAGAAATTA ACCCGCAAGA GGGATGGGTA CGAGTGCAGG CGGGGGTCAT TAAAGATCAA
CTCAATGATG CGGTACGCCC ACACGGTTTT TTCTTCTCTC CGGATCTTTC GACCAGTAAT
CGCGCGACGC TTGGCGGCAT GGTTAACACC GATGCTTCAG GGCAAGGGTC GCTACAATAT
GGCAAAACGT CGGATCACGT ACTCTCGCTG CAAGCGGTAT TTGCCGATGG TTCTTTGCTG
GAAACCGATC TCTCGCAAGG TTTGCCTGCT CCCAATACGT TTGCTGCGCA AGCGATGCAA
GTCACGGAGC AGGTTTGCCG CACCAAACGT AAGCAAATTG TCGCGAAATT TCCGCCGCTC
AACCGCTTTT TGACTGGATA CGATTTAAAA AATGCCCTAA ATGAAGCCGA AGATCGCTTT
GATATCACGC GGGTGTTGTG TGGTGCAGAA GGCTCACTGG CGTTTATTAC CGAAGCTAAA
CTCAATTTAA CGCCTATCCC CAAAGCACGC ACGTTAGTGA ATGTGAAATA CGACAGCTTT
GATTCTGCAC TGCGTAATGC GCCTTTAATG GTTGAAGCGA AAGCTTTGTC GGTAGAAACC
GTTGACTCGA AAGTGCTCAA TCTTGCCAAA GAAGACATTA TTTGGCACAG CGTAAAAGAC
TTGCTGACTG ATGTGCCTGG CAAAGAGATG CAAGGCATCA ATATGGTCGA ATACGCAGGC
CAAGACAGCG CGCAGATTAA TCAGCAAGTC GCACAATTAA CCGCGCGCCT TGATGAGATG
ATGGCCAACC AACAAGCGGG AATTATTGGC TATCAAGTCT GTAGTGATTT AGCGAGCATC
AACCGCATTT ACAATATGCG TAAAAAAGCG GTGGGCTTGC TCGGTGCAGC CAAAGGCCGC
GCTAAACCGG TTGCCTTTAC CGAAGATACC TGTGTGCCGC CTGAGAACTT AGCCGATTTT
ATCGTTGAAT TTCGCGCGCT GCTCGATTCC AAAAATCTGG CGTATGGCAT GTTTGGGCAT
GTGGATGCGG GCGTATTGCA TGTGCGTCCT GCGCTTGACT TGTGCGATCC CAAGCAAGAA
TTGTTGATGC GTGAAATCTC CGATCAAGTG GTTAAGCTCG TCGCTAAATA TGGCGGTTTG
ATGTGGGGGG AGCATGGCAA AGGCTATCGT TCGGAATATG GCCCTGAATT TTTTGGTGAG
GAGCTGTTCA CTGAACTGCG TCGTGTGAAA GCGGCGTTTG ACCCGCACAA TAAGATGAAT
CCGGGCAAGA TTTGTACCCC ACTTGATACA CCGTTTGAGC TGGTGAAAGT CTCCGACACT
AAACGTGGTT TTTACGATCG CCAAATCGAC GTCAAAGTGC GCGACAGCTT TAAGCAAGCG
ATGGAGTGTA ACGGTAACGG TTTGTGCTTT AACTACGAAA CTAGCTCCCC GATGTGTCCT
TCAATGAAGG TGACGGCGGA TCGTCGCCAC TCGCCGAAAG GGCGCGCAGG ATTAGTGCGA
GAATGGTTAC GTCAACTGAC GGAGCAGGGT ATTGATATCC TCGATCTTGA AAAAGCCACG
CTCGAATCCT CGCCAACAAT TAAATCTATG CTAGATCGGG TTCGTCATGC TTTTAGCAAA
GATAAAGAGT ACGACTTTTC GCATGAAGTG TACGAAGCGA TGAATGGTTG CTTGGCCTGT
AAGGCCTGTG CAAGCCAGTG TCCGATTAAG GTGGATGTGC CCAGTTTCCG TTCGCGTTTT
CTGAATATCT ATCACAGCCG TTATCCGCGC CCAGTCAAAG ATTATTTAGT CGCGAATATC
GAAACCTTAT TACCTGTGAT GGCGAAGGCT CCGCAACTGG TGAATAGTGT GTTAGCACAA
TCTTCGGTGC AAAAATTAAC CGCTAAAACG GTGGGTTATG TTGATGCGCC TCTCTTGTCG
GTACCAACAC TCGCACAGCG TTTACGCCGT CATCCCGTCG TCCTGTTTGA TATGCAGCGT
TTGGCGGGGT TATCGCAAGA AGAGCGCGAG CAACATGTGT TGATCGTGCA AGATCCGTTT
ACCAGTTATT ACGATGCGGA TGTGGTCGAA GATTTTGTCG CCCTGCTGCT TAAATTAGGC
AAAAAACCAG TATTGTTGCC GTTTAAACCC AATGGCAAAG CGCAACATAT TAAGGGCTTT
CTACGCCAAT TTCGTTCGAC GGCAGCGAAT TCCGCGGCAT TTCTGACTCA AGTGGCGGAT
CTCAATATTC CGCTCGTGGG TGTAGATCCT GCTTTGGTGC TTTGCTATCG CGATGAGTAT
GTTGAAATAT TAGGCAAAGA GCGCGGTGAG TTTTCGGTTC TGACGGTTCA TGAATGGCTC
AAACCACGCC TGTCGCAGTT TACGCCTCAA GTAACCGATG CACAGCCTTG GTACTTATTG
GCGCACTGTA CGGAGAAAAC TAAGCTGCCG AATGCGGAAA AAGAGTGGGT GGAAATCTTC
CGCCACTTTG GTACGCAGCT CAATGCGGTG GCGGTAGGGT GCTGTGGTAT GGCGGGTACC
TTTGGTCATG AGGTGGATAA ATTAACCATG TCTCGCGATA TTTACGATTT GAGTTGGCAA
CCCGCATTAG CGTCGCTACC GAAAGAGCGC TGTTTGGTCA CCGGTTACTC GTGTCGTAGC
CAAGTGAAAC GGTTTGAGCA AATCAAACCT AAGCATCCGT TGCAGGCTCT GTTACACTTG
CTATAA
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| Protein sequence | MDQRSRGRKQ MLPRLHHQSD VDPVVLTFLH ELKTAGFTGD IETQYSSRLA VATDNSVYQQ
LPQAVVHPKS TADVVLIGKI SSKPEFERVT FSPRGGGTGT NGQSLTKGVV VDLSRHMNRI
LEINPQEGWV RVQAGVIKDQ LNDAVRPHGF FFSPDLSTSN RATLGGMVNT DASGQGSLQY
GKTSDHVLSL QAVFADGSLL ETDLSQGLPA PNTFAAQAMQ VTEQVCRTKR KQIVAKFPPL
NRFLTGYDLK NALNEAEDRF DITRVLCGAE GSLAFITEAK LNLTPIPKAR TLVNVKYDSF
DSALRNAPLM VEAKALSVET VDSKVLNLAK EDIIWHSVKD LLTDVPGKEM QGINMVEYAG
QDSAQINQQV AQLTARLDEM MANQQAGIIG YQVCSDLASI NRIYNMRKKA VGLLGAAKGR
AKPVAFTEDT CVPPENLADF IVEFRALLDS KNLAYGMFGH VDAGVLHVRP ALDLCDPKQE
LLMREISDQV VKLVAKYGGL MWGEHGKGYR SEYGPEFFGE ELFTELRRVK AAFDPHNKMN
PGKICTPLDT PFELVKVSDT KRGFYDRQID VKVRDSFKQA MECNGNGLCF NYETSSPMCP
SMKVTADRRH SPKGRAGLVR EWLRQLTEQG IDILDLEKAT LESSPTIKSM LDRVRHAFSK
DKEYDFSHEV YEAMNGCLAC KACASQCPIK VDVPSFRSRF LNIYHSRYPR PVKDYLVANI
ETLLPVMAKA PQLVNSVLAQ SSVQKLTAKT VGYVDAPLLS VPTLAQRLRR HPVVLFDMQR
LAGLSQEERE QHVLIVQDPF TSYYDADVVE DFVALLLKLG KKPVLLPFKP NGKAQHIKGF
LRQFRSTAAN SAAFLTQVAD LNIPLVGVDP ALVLCYRDEY VEILGKERGE FSVLTVHEWL
KPRLSQFTPQ VTDAQPWYLL AHCTEKTKLP NAEKEWVEIF RHFGTQLNAV AVGCCGMAGT
FGHEVDKLTM SRDIYDLSWQ PALASLPKER CLVTGYSCRS QVKRFEQIKP KHPLQALLHL
L
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