| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0815 |
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| Symbol | |
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| ID | 5135901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 826318 |
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| End bp | 826989 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532273 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216765 |
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| Protein GI | 147673077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGAACA AAACCACTTT GCTGTTAGCC GCAGTCGTCG CTTTGTCTGG CTGTCAGGCT
ACCCAACGCC AAAATGCGAC AACCGGAGAA ACAGAAACCA ACGCCACCAC TAAAGGTGCA
TTATTAGGCG TCCTAGCCGG TGCAGCCGTT GGTTTAGCGA CAGGTGACGA TGCCAAAGAG
CGCCGTAAGC ATGCCTTAAT TGGTGCAGCT GGGGGCGCTG CAGTCGGCGG CGGTATCGGA
TACTACTTTG ATCAGCAAGA AGCAGAGTTA CGCAAAGCAT TACTGGATTC TGGTGTTCAA
GTGGTACGCG TAGGTGAAAA TCAACTGATG CTACGCATGG AAAACGGTAT TGGCTTTACC
AGCAACTCTT ACCAACTGGA TAGCTATATC CATAAAACTT TACGCGGTGT CGCGCGTATT
CTGGTCGAAT ACCCAGATAC CAGCTTAGTG ATTGAAGGCC ATACCGATAG CACAGGTAGT
GATACCACCA ACCAAGTGCT TTCTGAGAAG CGTGCCGAGT CAGTGCGTTC ATTCCTGTTA
TCTCAAGGGG TTGCAGCGGG GCGTGCAATT GCTCGTGGTA ATGGTGAGCG TTTCCCTCTA
TGCTCAAATA ACACCGCAGA AGGACGCGCT TGTAACCGCC GCGTCGAGAT TCAAATTCTG
CCACTCAAAT AG
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| Protein sequence | MLNKTTLLLA AVVALSGCQA TQRQNATTGE TETNATTKGA LLGVLAGAAV GLATGDDAKE
RRKHALIGAA GGAAVGGGIG YYFDQQEAEL RKALLDSGVQ VVRVGENQLM LRMENGIGFT
SNSYQLDSYI HKTLRGVARI LVEYPDTSLV IEGHTDSTGS DTTNQVLSEK RAESVRSFLL
SQGVAAGRAI ARGNGERFPL CSNNTAEGRA CNRRVEIQIL PLK
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