| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0809 |
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| Symbol | sfcA |
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| ID | 5136256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 820200 |
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| End bp | 821888 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532267 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001216759 |
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| Protein GI | 229259764 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG ATAAACGTCC GCTGTATATT TCCTACGCAG GCCCAGCTCT TCTCAGTACT
CCTCTGCTCA ACAAAGGTAG TGCCTTTAGT GCGGAAGAAC GTGCTTCTTT TAACCTAGAA
GGTTTACTGC CCGAAGCGAC GGAAACCATT CAAGAACAAG TGGTACGCGC ATACCAACAG
TACCGTGGTT TTGAAAGCGA CATGGATAAG CATATTTATC TGCGCAACAT TCAAGACACC
AACGAGACCC TATTCTACCG CTTGGTGCAG AACCATATTT CCGAGATGAT GCCAATCATC
TATACCCCGA CAGTGGGTGC GGCGTGTGAG AACTTCTCCA ACATTTATCG CCGTGGCCGT
GGCTTGTTTA TCTCTTACGC TAACCGTGAT CGTATTGATG ACTTGTTGAA CAATGCCGCC
AACCACAACG TCAAAGTGAT TGTGGTGACC GATGGCGAGC GTATTCTCGG CCTTGGCGAC
CAAGGTATCG GCGGTATGGG GATTCCTATC GGTAAACTGT CACTTTACAC CGCTTGTGGT
GGCATTAGCC CAGCGTATAC GCTTCCTGTG GTTCTGGATG TGGGTACGAA TAACCCGCAA
CGTCTTGCTG ACCCTATGTA CATGGGCTGG CGTCATCCAC GTATCACTGG ACCTGACTAC
GACAACTTTG TTGAAGAGTT TATGCAAGCC GTGCAACGTC GCTGGCCAGA TGCATTGATC
CAGTTTGAAG ACTTTGCCCA AAAGAACGCC ATGCCACTGC TTGAGCGTTA CAAAAATCGC
GTGTGCTGTT TTAACGACGA CATTCAGGGC ACAGCGGCGG TCACTGTCGG CTCACTGCTT
GCTGCCTGTA AAGCGGCGGG TAGCCAGCTT TCACAACAAC GTATTACCTT CTTGGGCGCG
GGCTCTGCAG GCTGCGGTAT CGCGGAAGCG ATCATTGCGC AAATGGTGTC TGAAGGCATC
AGCGATGAGC AAGCGCGCTC ACAAGTTTAC ATGGTGGATC GCTGGGGCCT GCTCGAAGAA
GGCATGCCAA ATTTGCTCGA CTTCCAACAG CGCCTAGTGC AGAAAAAAGC CAACACGCAA
CATTGGACAA CGGAAAACAA CGGCTACTCG CTGCATGATG TGATCCGCAA TGCCAAACCG
ACTGTACTGG TTGGTGTGTC TGGTGCGCCC GGTCTGTTTA GTGAAGAGAT CATCAAAGAG
ATGCATCAGC ACTGTCCACG CCCTATTGTC TTCCCGCTAT CGAACCCAAC AAGCCGTGTT
GAAGCTCTGC CGAGCGATAT TATCCGTTGG ACTAACGGTG AGGCTTTGGT TGCAACAGGT
AGCCCGTTTG ATCCTGTGCT GCATGAAGGC AAAACTTACC CAATTGTGCA ATGTAACAAC
AGCTACATTT TCCCGGGTAT CGGTTTAGGA GTTTTGGCAG CAAACGCACG CCGCGTTACC
GACGAAATGC TGATGGAGTC GAGCCGTGCA CTGGCAAGTT GCTCACCGCT TGCCATCAAT
GGTCATGGAC CATTATTGCC GCCTCTGGAA TCTATCCACT CTGTTTCGAA GAAGATTGCT
TTCGCAGTAG CGAAAAAAGC GATTGAACAG GGTGTGGCTC CAGAAGTCAC CGATGAAGCG
CTGGAAGCCT CAATTGAACA ACATTTCTGG CAACCAGTTT ACCGCCGTTA TAAGCGCACT
GCGTTTTAA
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| Protein sequence | MNNDKRPLYI SYAGPALLST PLLNKGSAFS AEERASFNLE GLLPEATETI QEQVVRAYQQ
YRGFESDMDK HIYLRNIQDT NETLFYRLVQ NHISEMMPII YTPTVGAACE NFSNIYRRGR
GLFISYANRD RIDDLLNNAA NHNVKVIVVT DGERILGLGD QGIGGMGIPI GKLSLYTACG
GISPAYTLPV VLDVGTNNPQ RLADPMYMGW RHPRITGPDY DNFVEEFMQA VQRRWPDALI
QFEDFAQKNA MPLLERYKNR VCCFNDDIQG TAAVTVGSLL AACKAAGSQL SQQRITFLGA
GSAGCGIAEA IIAQMVSEGI SDEQARSQVY MVDRWGLLEE GMPNLLDFQQ RLVQKKANTQ
HWTTENNGYS LHDVIRNAKP TVLVGVSGAP GLFSEEIIKE MHQHCPRPIV FPLSNPTSRV
EALPSDIIRW TNGEALVATG SPFDPVLHEG KTYPIVQCNN SYIFPGIGLG VLAANARRVT
DEMLMESSRA LASCSPLAIN GHGPLLPPLE SIHSVSKKIA FAVAKKAIEQ GVAPEVTDEA
LEASIEQHFW QPVYRRYKRT AF
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