| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0806 |
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| Symbol | |
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| ID | 5135870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 817659 |
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| End bp | 818990 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532264 |
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| Product | GGDEF family protein |
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| Protein accession | YP_001216756 |
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| Protein GI | 147674355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGTGC TGCCAAGAGT GTTATTAGGA TTAGTCGCGG TCACGATTGT GACCGTATTG
CTGTACTGGC AGTTTGGTTC TGCGAAACGA GTGTTGATTG AACCTCAACA CTATGCCTAT
TTCACCACCA ACGATCAAAC CGCTGGCGGC ACATCAACCA GCGCCTTATC CCTCAATGGC
AATACTGCCA AAGTGGACTG TGAATTGAAT GCCAGTCGCT ACGCGTGGCC ATATTGTGGC
ATCTCTATTC ACCTTAATCC CGACCCTCAA CGTGGCCTCG ATTTGAGTGA TATCCATACC
ATACGTCTTA ACGTGGACTT GCAAGGCCCC GCTGCAGAGC CTGCGGCAAT GCGTCTGTAT
TTACGTAATT TCAATCCGAT CTACTCTCAG CTTGATGATG AATATACTCA TAAATACAAC
GGATTAGAGT TTGTGCCGGG CGTTGGGAAA GGTGTGATTG ATATTCCCAT TCGCAGCTTG
CAAGTAATGA CGTGGTGGTT GGTTGATAAT CGTATTGCCA TTGAACACTC CGCTCCTGAG
TTTTCCAACG TCAATAAAAT TGAATTTGCG ACCGGTTCAG CCAGTCCACT AGGGCAATAT
CAATTGACCG TGCATCAAGT GGAATTGATT GGGGATTATG TGGCTGGAGA GAAGCTGTTT
CTTGCCATGT TGATCATGTG GGCGGTGGCA GGAGCATGGC TCTCTGCGCT CGAAATTCGT
CGTAATCGTC GTGAGGTTTT ACGTGCTCGT ATGCGCCAAG AGCACTTACA GCGTTTGAAT
CACTCATTGC ATGAGCAAAA CATAAAGTTC GTCGAAATGG CGCATCGTGA TGCATTGACG
GGAGCCATTA ATCGGCATGG CATTCGTGAT TGGTTGCAAG ATCAAGCGCG CTTAGTGCGC
TGGCAACTCA ATCACGTTAG CGTACTGTTC ATCGATATTG ATTACTTCAA ACAAGTCAAC
GATGTGTACG GACACAGTCT AGGGGATGAT CTGCTGCGTG AGTTTGCTTT GGTTATCAGC
CGTGAAATCC GAGAAAGTGA CAAATTAGTG CGTTGGGGTG GGGAAGAGTT TGTGGTGTTT
TGCGCGCAGA CAACCCTTGA GCAAGCGATT GAGCTTGCAG AGCGGCTTAG AGCTAAAATC
GCCGACCACA GTTGGATACA CGGAGGCGCG ATCACGTGCA GTCTCGGTAT TGCCCAAATG
GGCGACGAGC GGATTACGGA AACCGTTTCA CGCGCCGACG AAGCGTTATA CCGAGCCAAA
CGGCTTGGCC GCAATCGAAT CGAAGTTCAC TATGGATTAA TGGCCAAAAG CAGTGATGGA
GAAAAAGGGT GA
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| Protein sequence | MKVLPRVLLG LVAVTIVTVL LYWQFGSAKR VLIEPQHYAY FTTNDQTAGG TSTSALSLNG
NTAKVDCELN ASRYAWPYCG ISIHLNPDPQ RGLDLSDIHT IRLNVDLQGP AAEPAAMRLY
LRNFNPIYSQ LDDEYTHKYN GLEFVPGVGK GVIDIPIRSL QVMTWWLVDN RIAIEHSAPE
FSNVNKIEFA TGSASPLGQY QLTVHQVELI GDYVAGEKLF LAMLIMWAVA GAWLSALEIR
RNRREVLRAR MRQEHLQRLN HSLHEQNIKF VEMAHRDALT GAINRHGIRD WLQDQARLVR
WQLNHVSVLF IDIDYFKQVN DVYGHSLGDD LLREFALVIS REIRESDKLV RWGGEEFVVF
CAQTTLEQAI ELAERLRAKI ADHSWIHGGA ITCSLGIAQM GDERITETVS RADEALYRAK
RLGRNRIEVH YGLMAKSSDG EKG
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