| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0800 |
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| Symbol | |
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| ID | 5136291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 809332 |
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| End bp | 810297 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532258 |
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| Product | pseudouridine synthase family 1 protein |
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| Protein accession | YP_001216750 |
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| Protein GI | 147673214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AGTTACAAAA AGTTTTAGCA CGTGCTGGTC ATGGTTCTCG TCGTGAGCTT
GAAGCTCTGA TCCGAGCTGG GCGTGTAAGT GTTAATGGCA AGGTAGCTGT ACTGGGCGAA
CGCCTAGAAG ATGATAACGC TGTCGTGCGC ATCGATGGAC ATGTTGTGTC TGTGAAAGCG
CAAGAAGAGG TGATCTGCCG AGTTCTGGCT TATTACAAAC CAGAAGGCGA GCTGTGTACC
CGTCATGATC CAGAAGGTCG CCGTACGGTA TTTGACCGTC TGCCGAAAAT TCGTGGTTCA
CGCTGGATTT CTGTTGGCCG TTTGGACGCC AACACGTCAG GTTTGCTGCT GTTTACCACC
GATGGTGAAC TGGCTAACCG TTTAATGCAC CCAAGCCGTC AGGTAGAACG TGAATATCTG
GTTCGCGTCT TTGGTGACGT GACGGAAGAA AAAGTTCGCA ATCTCGTACG TGGTGTGCAG
CTAGAAGATG GTATGGCGCG TTTTGAAGAT GTGATGTACG CCGGTGGCGA AGGCATCAAC
CATACTTTCT ACGTGGTAAT CAATGAAGGT CGTAACCGTG AAGTGCGTCG TCTGTGGGAA
TCACAAGGTA CGACAGTAAG CCGTCTGAAG CGCGTACGTT ACGGTGATAT TTTCCTCGAC
AAAAAACTGC CTCGCGGCGG TTGGATGGAG CTTGATCTCA AGCAAGTGAA CTACCTGCGT
GAGTTAGTAG AACTGCGTCC AGAGAAAGAA ACGGTGCTGA ACATGGCGCC TGATGCCGCA
ACGCGTAAGC GTGAGCGTAC CCGTAGCCAG AAAATTCGTC GTGCAGTACG TCGTCACGAA
GAGCGAATTT CAGCTACTCC GGGTCGTAGT GGAAAAGCCC CTGCGTGCCG TAAGCCGGGT
GGTGAATCGA GCACGCGCAA TAAAGTGGCT AACCAGCAAC AAAGCTCGCG TAAGCCGCGC
GGATAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREL EALIRAGRVS VNGKVAVLGE RLEDDNAVVR IDGHVVSVKA
QEEVICRVLA YYKPEGELCT RHDPEGRRTV FDRLPKIRGS RWISVGRLDA NTSGLLLFTT
DGELANRLMH PSRQVEREYL VRVFGDVTEE KVRNLVRGVQ LEDGMARFED VMYAGGEGIN
HTFYVVINEG RNREVRRLWE SQGTTVSRLK RVRYGDIFLD KKLPRGGWME LDLKQVNYLR
ELVELRPEKE TVLNMAPDAA TRKRERTRSQ KIRRAVRRHE ERISATPGRS GKAPACRKPG
GESSTRNKVA NQQQSSRKPR G
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