Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0781 |
Symbol | |
ID | 5136257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 793658 |
End bp | 794272 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640532239 |
Product | hypothetical protein |
Protein accession | YP_001216731 |
Protein GI | 147674863 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000208044 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATCCA CTAACCCACA AGCAGGCTTT CGCACTAACA ACCTTGGTCA CTTGGTGCCT GAGAGCCAAA TCAAAGAGAT CGACAAACTG CGTGATGAAG TCGTGCTCGA TATCGTTGCC AAAGCGAAAG CCACACAGCA GGCCATGGCC GCATTCAAAA GCGAAGCAAT GGCACAGGTC GCCGACTTTG TAGACCTTTC CGCCGAAGAG TTTGATGTGA AGTACGGCGG CGTGAAGGGT AACGTCACCC TCGTCTCGTT CGATGGTAAG TACAAAATCC AGCGCAGCAT TGGTGAGCAT CGAATCTTTG ATGAACGCAT TCAAGCGGCC AAAGCCAAGA TTGACGAGTG CATTACGCGC TGGTCGGAAG GCTCAAGCGA TCAAATCAAA GCCTTGGTTG AGCTTGCATT CCGCGTCAAC AAACAAGGCC ACATCGACGT TAACCAAGTG CTGAGCCTGC GCCAGCTCAA CATCGATGAC AAAGACTGGA TCGAAGCGAT GGACGCCATT GCAGACTCCA TCAAAGTGGT GGGTAAAACC CCTTACCTGC GCATCTATGA GCGCGATTCA AACGGCGGTT ATAAACAGAT CGCACTCGAT ATCGCCAAGC TCTAA
|
Protein sequence | MQSTNPQAGF RTNNLGHLVP ESQIKEIDKL RDEVVLDIVA KAKATQQAMA AFKSEAMAQV ADFVDLSAEE FDVKYGGVKG NVTLVSFDGK YKIQRSIGEH RIFDERIQAA KAKIDECITR WSEGSSDQIK ALVELAFRVN KQGHIDVNQV LSLRQLNIDD KDWIEAMDAI ADSIKVVGKT PYLRIYERDS NGGYKQIALD IAKL
|
| |