Gene VC0395_A0728 details

Gene Information

• Locus tag: VC0395_A0728
• Symbol: serC
• ID: 5136180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 755035
• End bp: 756174
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640532186
• Product: phosphoserine aminotransferase
• Protein accession: YP_001216678
• Protein GI: 147674623
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG1932] Phosphoserine aminotransferase
• TIGRFAM ID: [TIGR01364] phosphoserine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000226259
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTATTAA TCACAACACT TTTCGTTAGC AGGAGCAATG AACACATGGA GCACAACACC 
GATACGGTTT ATAACTTTAG TGCGGGTCCC GCCGCCTTGC CTAAGGCTGT GATGCTGCAA 
GCACAAGCGG AGTTTGTAAA CTGGAATCAT CTTGGCACTT CGGTGATGGA AATTAGCCAC 
CGTAGTCAGC CATTCATTCA AGTGGCCGAG CATGCTGAGC GCGATCTGCG CGATCTTCTG 
AATATCCCAG ATAATTACAA AGTACTGTTT TGCCAAGGCG GAGCGCGTGC ACAGTTTGCG 
GCTGTACCAC TTAACTTGCT CGGGGATGCA GAGACGGCAA CCTACATTGA TGCCGGTTAC 
TGGGCGATGA GCGCAGTGAA AGAAGCGAAG AAATACTGCA CCGTCGATGT TTTTGACGCC 
AAAATTGAAA AAGAAGGCAA AATTGCCGTA TTACCTGCGA GCGAATGGCG CATTGCGAAC 
AATGCTGCCT ATGTGCACTT CTGCCCGAAT GAAACGATTG ATGGTATTGA AATCAACGAT 
TTGCCTGTCA CAGACAAACC GATTGTTGCC GATATGTCTT CGACCATTTT ATCTCGTGAA 
ATTGATGTAT CGAAATACGG CGTGATTTAC GCTGGCGCGC AGAAGAATAT TGGACCTGCG 
GGGATCTGTA TCGCCATCGT GCGCGATGAT TTGCTGGATT TGGCTAGCGA TCTGTTACCG 
GGAGTACTTA ACTACAAAAT TCTTGCTGAG CAAGAGTCGA TGTTTAATAC CCCGCCTACC 
TTTGCTTGGT ATCTCTCCGG CCTTGTTTTC CAATGGTTGA AAGCACAAGG TGGCGTCAAA 
GCGATTGAAG AAGTGAACCG TGCAAAAGCG GCGCTGCTTT ATGGCTATAT TGATTCATCC 
GATTTCTACC GTAACGAGAT CCATCCAGAC AACCGTTCGC TGATGAACGT CCCATTCCAA 
CTGGCGAAAC CCGAGTTGGA CGATACCTTC TTGGAACTGG CTGAAGCGCG TGGCTTGGTG 
TCATTGAAAG GGCACCGTGT TGTGGGGGGG ATGCGTGCCT CTATCTATAA CGCGATGCCG 
CTAGAGGGTG TGCAAGCGCT GGTCGATTTT ATGAAAGAGT TTGAAGCGCA ATACGCTTAA 

 

Protein sequence

MVLITTLFVS RSNEHMEHNT DTVYNFSAGP AALPKAVMLQ AQAEFVNWNH LGTSVMEISH 
RSQPFIQVAE HAERDLRDLL NIPDNYKVLF CQGGARAQFA AVPLNLLGDA ETATYIDAGY 
WAMSAVKEAK KYCTVDVFDA KIEKEGKIAV LPASEWRIAN NAAYVHFCPN ETIDGIEIND 
LPVTDKPIVA DMSSTILSRE IDVSKYGVIY AGAQKNIGPA GICIAIVRDD LLDLASDLLP 
GVLNYKILAE QESMFNTPPT FAWYLSGLVF QWLKAQGGVK AIEEVNRAKA ALLYGYIDSS 
DFYRNEIHPD NRSLMNVPFQ LAKPELDDTF LELAEARGLV SLKGHRVVGG MRASIYNAMP 
LEGVQALVDF MKEFEAQYA