| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0719 |
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| Symbol | |
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| ID | 5137142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 744921 |
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| End bp | 746567 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532177 |
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| Product | putative glutamate decarboxylase |
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| Protein accession | YP_001216669 |
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| Protein GI | 147674182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCAG AACACAAATC CGCGCAAGTC AACTTCGATT CTCTGCTCAA GATCTTCACC
GTACCGGAAG GTCCAGACTC AACATTAACT AAAATCGATG AAGAGCTTTC TCGCAATTTA
AACCACTTCT TGCGCAAACA CATTGTGGCA GAAGAAAAGC CGCTCAAAGA GATTGAGAAA
GATTTTTCCA ACGCGCACAT TCCCGAACAG CCTCAATTCG TTTCCGATCA TACCCAATAT
TTACTGGATA CTCTGGTGTC ACACTCAGTG CACACCGCAT CGCCCAGTTT TATTGGCCAC
ATGACATCGG CACTGCCCTA CTTCCTGATG CCGCTGTCAA AAATTATGAT CGCTCTCAAC
CAGAATCTGG TCAAAATTGA AACCTCGAAG GCATTCACGC CGCTAGAGCG TCAAGTGCTA
GGCATGATCC ATCGCTTGAT TTATGGCGAG ACGGATCACT TCTATCAACA GTGGATGCAC
AGTGCTGAGC ACTCACTCGG CGCTTTCTGC TCAGGCGGAA CCATAGCCAA CATTACGGCA
CTTTGGGTTG CTCGTAATAA TGCGCTTAAA GCAGAAGGCG ATTTCCCCGG CGTTGAAAAA
GCTGGGCTCT TCAAAGCCAT GCGCCACTAC GGTCATGAAG GTTTAGCCAT TTTGGTTTCC
GAACGAGGCC ACTACTCGTT GAAAAAAGCG GCCGATGTGC TGGGTATAGG CCAAGAAGGC
TTGGTCGCGG TCAAAACCGA TGCGCATAAC CGTATCTGCC CACACGATCT AGAGCAGAAA
ATCACCGAGT TAAAAGCCAA TAAGATCAAA GTGTTTGCCG TTGTCGGAGT CGCCGGCACC
ACAGAAACCG GCAATATTGA CCCACTGCGC ACCATTGCTC AGATTTGTCA GCGTGAACAG
ATCCACTTCC ATATCGATGC GGCTTGGGGC GGCGCGACGT TAATGTCAAA CCGTTATCGA
GGACTGCTTG ATGGTGTCGA GTTGGCCGAT TCAGTGACCA TTGATGCTCA TAAGCAGCTC
TACATCCCTA TGGGTGCGGG TATGGTCTTG TTTAAAGACC CGAATGCGAT GCGCTCAATT
GAGCATCATG CCCAGTACAT TTTGCGTCAA GGCTCTAAAG ATTTGGGTAG CCATACCCTA
GAAGGATCAC GCTCAGGCAT GGCGATGTTG GTTTACGCCA GCATGCACAT CATTAGCCGC
CCAGGCTATC AGCTACTTAT CGATCAAAGT ATTGAAAAAG CGCGATATTT TGCCGACCTG
ATTGATGCGC AAACTGACTT TGAGTTGGTT TCGCAACCGG AACTCTGCTT GTTGACTTAT
CGCTATCTAC CCGAGCATGT CCGCATGGCG CTAGAAAAAT CGCAAGGGGT ACAGCGTGCG
CAGTTGAATG AGCTACTGAA CGAACTCACT AAGTTTATTC AGAAGAAACA AAGGGAAACG
GGTAAATCCT TTGTGTCACG TACCCAACTC AATCCACACC AATGGGATAA ATTGGCAACC
ATAGTCTTCC GAGTGGTATT GGCCAACCCG CTGACGACCA AAGAAATTTT GCATAACGTG
CTGGATGAAC AACGAGAAAT CGCGCAACAA GCGCCAAAGT TGATGCGTCA AATCGAACAT
CTAACCCAAT GCATTCTGAA CCAATAA
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| Protein sequence | MVSEHKSAQV NFDSLLKIFT VPEGPDSTLT KIDEELSRNL NHFLRKHIVA EEKPLKEIEK
DFSNAHIPEQ PQFVSDHTQY LLDTLVSHSV HTASPSFIGH MTSALPYFLM PLSKIMIALN
QNLVKIETSK AFTPLERQVL GMIHRLIYGE TDHFYQQWMH SAEHSLGAFC SGGTIANITA
LWVARNNALK AEGDFPGVEK AGLFKAMRHY GHEGLAILVS ERGHYSLKKA ADVLGIGQEG
LVAVKTDAHN RICPHDLEQK ITELKANKIK VFAVVGVAGT TETGNIDPLR TIAQICQREQ
IHFHIDAAWG GATLMSNRYR GLLDGVELAD SVTIDAHKQL YIPMGAGMVL FKDPNAMRSI
EHHAQYILRQ GSKDLGSHTL EGSRSGMAML VYASMHIISR PGYQLLIDQS IEKARYFADL
IDAQTDFELV SQPELCLLTY RYLPEHVRMA LEKSQGVQRA QLNELLNELT KFIQKKQRET
GKSFVSRTQL NPHQWDKLAT IVFRVVLANP LTTKEILHNV LDEQREIAQQ APKLMRQIEH
LTQCILNQ
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