| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0711 |
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| Symbol | icd |
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| ID | 5137167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 734255 |
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| End bp | 736480 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532169 |
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| Product | isocitrate dehydrogenase, NADP-dependent, monomeric type |
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| Protein accession | YP_001216661 |
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| Protein GI | 147673535 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACCA ATAAACCTAC AATTATTTAT ACCATTACTG ATGAAGCCCC AGCGCTGGCA
ACGTATTCAT TACTGCCGAT TATTCAATCA TTTACTGCTT CATCAGGCAT TAACGTAGAA
ACACGCGATA TTTCATTAGC TGGTCGTATT CTGGCTAATT TCCCTGAGCA TTTGACCGAA
GAACAACGTA TCAGCGATGC GTTGACTGAA CTGGGTGAGC TAGCAAAAAC GCCTGAAGCG
AACATCATTA AACTGCCAAA TATTTCTGCT TCTGTTCCTC AACTCAAAGC GGCGATTAAA
GAGCTGCAAG ACAAAGGCTA CGCACTGCCA AATTACCCAG AAGAACCGAG TAGCTACGAA
GAAGAAGCGA TCAAAGCAAC TTATGACAAG ATCAAGGGTA GCGCGGTAAA CCCAGTGTTA
CGTGAAGGTA ACTCCGATCG CCGTGCTCCA GCCTCGGTGA AAAACTACGC CAAGAAAAAC
CCGCACTCCA TGGGCGCTTG GAGTAAGGAT TCAAAATCAC ATGTTGCAAG CATGAGCGAT
AAAGATTTCT TCGGTAGCGA GAAGTCGATG ACGGTGAGCG GCGCAACTAA AGTGGCGATT
GAGTTCGTGG GTAAAGAGGG TGCAGTGAAA GTGCTGAAAA AGCCTTTTGC GCTGCAAGAT
AAAGAGATCA TCGATACCAG CGTGATGAGC AAAAAAGCGC TGATTGCCTT CTTTGAAAAA
GAAATCGCGG ATGCGAAAGC GCAAGACGTG CTGTTCTCAC TGCACATGAA AGCGACCATG
ATGAAAGTCT CGGATCCAGT GATCTTCGGT CATGCGGTGA AGGTGTACTA CAAAGCGGTT
TTTGATAAGT ATGGTCAACT GTTCGATCAG CTGGGTGTGG ACGTTAATAA CGGCTTAGGT
GATGTCTACG CTAAAATTCA ATCGCTGCCA GAAGCGCAAC GTGCAGAAAT TGAAGCGGCG
ATTCAAGCGG TATATGCGAC GCAACCCGCT CTGGCGATGG TGGACTCTGA CCGCGGTATC
ACCAACCTGC ATGTACCAAG CGATGTGATT GTTGATGCGT CTATGCCAGC AATGATCCGT
ACTTCAGGCC AAATGTGGGG CCCTGATGGT AAGCAGAAAG ACACCAAAGC GACGATTCCC
GATCGCTGCT ACGCAGGCGT TTACCAAACC GTCATCGATT TCTGTAAACA GCACGGCGCG
TTTGACCCAA CTACTATGGG CAGTGTGCCC AACGTGGGTC TGATGGCACA AAAAGCAGAA
GAGTACGGCT CACACGATAA GACCTTTATT CTGGATGCTG AAGGTGTGGT GCGTGTGATT
GACGAAGCGG GCAAAGTGCT GCTGGAACAA AGCGTGGAAG CGGGCGACAT CTTCCGCATG
TGTCAGGTAA AAGATGCGCC AATCCAAGAT TGGGTAAAAT TGGCGGTAAC TCGTGCTCGC
GCTTCCAACA CGCCAGCCGT TTTCTGGCTG GATCCTGCAC GCGCTCATGA CGCTGAGTTG
ATCAAGAAAG TGAATCAGTA CCTACCTAAT CACGATACCT CTGGTTTAGA AATCAAGATC
CTGTCACCGA TTGAAGCCAC GCAATATTCA CTTGTGCGTA TGAAGGCGGG ACAAGACACC
ATTTCTGTAA CAGGTAACGT GCTACGTGAT TACTTGACTG ACTTATTCCC AATCCTTGAA
CTGGGTACTT CGGCGAAAAT GCTCTCTATC GTTCCGTTGA TGAACGGTGG TGGTTTGTTT
GAAACGGGCG CGGGCGGCTC GGCACCGAAG CACGTACAAC AAGTACAAAA AGAGAACCAC
TTACGTTGGG ATTCACTGGG TGAGTTTTTA GCGCTAGCCG CATCTCTGGA GCACTTGAGT
GTGGTCACTG GCAATCGCAA AGCACAAGTG TTGGCGGATG CGCTTGATAA AGCGACGGGT
AAGTTCCTCG ATATGAACAA ATCGCCTTCA CGCCGTGTCG GTGAAATTGA CAACCGTGGT
AGCCATTTCT ATTTGGCGAC TTACTGGGCG CAAGCACTGG CTGAACAAAC GGCAGATGCA
GATCTCGCAG CTGAGTTTGC TCCGATTGCA AAAGCGCTTG AAGAGAAAGA AGCGCAAATT
GTCGCAGAAC TGAATGGCGC GCAAGGCAAG CCTGGCGATT TGGGTGGCTA TTACGCACCT
GAGTTTGCGA AGGTGGCTCC GCTTATGCGT CCTAGCTCGA CCTTCAACGC GATCATTGAC
CGTTAA
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| Protein sequence | MPTNKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVE TRDISLAGRI LANFPEHLTE
EQRISDALTE LGELAKTPEA NIIKLPNISA SVPQLKAAIK ELQDKGYALP NYPEEPSSYE
EEAIKATYDK IKGSAVNPVL REGNSDRRAP ASVKNYAKKN PHSMGAWSKD SKSHVASMSD
KDFFGSEKSM TVSGATKVAI EFVGKEGAVK VLKKPFALQD KEIIDTSVMS KKALIAFFEK
EIADAKAQDV LFSLHMKATM MKVSDPVIFG HAVKVYYKAV FDKYGQLFDQ LGVDVNNGLG
DVYAKIQSLP EAQRAEIEAA IQAVYATQPA LAMVDSDRGI TNLHVPSDVI VDASMPAMIR
TSGQMWGPDG KQKDTKATIP DRCYAGVYQT VIDFCKQHGA FDPTTMGSVP NVGLMAQKAE
EYGSHDKTFI LDAEGVVRVI DEAGKVLLEQ SVEAGDIFRM CQVKDAPIQD WVKLAVTRAR
ASNTPAVFWL DPARAHDAEL IKKVNQYLPN HDTSGLEIKI LSPIEATQYS LVRMKAGQDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVQKENH
LRWDSLGEFL ALAASLEHLS VVTGNRKAQV LADALDKATG KFLDMNKSPS RRVGEIDNRG
SHFYLATYWA QALAEQTADA DLAAEFAPIA KALEEKEAQI VAELNGAQGK PGDLGGYYAP
EFAKVAPLMR PSSTFNAIID R
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