Gene VC0395_A0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0698 
Symbol 
ID5135316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp720876 
End bp722114 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content47% 
IMG OID640532156 
Producthypothetical protein 
Protein accessionYP_001216648 
Protein GI147674497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGC TACAGAACGG CTCACAAGTT TCAGTAAGAC CACAGCGCAA GCCTTTAGTC 
GGGTTGGGTG GCTATTTTTC AGAAAGCAAT GACCAAGGCG CACCAAGTTA TCCAGGACAA
GATTGGTTTA ACGACTGTAC CGATGAGTTT ATAAACGCAC TGGATGAAAT GGGCATCACT
TACGATCAAG AGCAGCTTGA TCACCTAGCT CGCGCCTTTG CTGCCGTCCG TTCCCAAGAG
TGGAATGCAA ATGTTAACTA CGGCATCGGA CAAGAAGTTG TCCGCAATAA CCTGCGCTAT
ATCGCTCGCG CTGCGTCAGG GCCGGATAAT GGCGGGGCGA TTACTCCAGA GAATAACTCG
GGTAGTACTT GGGACTTGGT TTTACCTCAA GCATATAGCA CAACTGATAC GCAAACAGAT
TGGTTACGGC TGGCTCTCGT TGTGGGAGAC AACAACGGCG CGGGTGACTT TTTGTCATTA
GAAGTGATCG GCGGCTCTGA TTTTGGGGTA AACACAAGAT TTAGCGCAGA TATTATGATT
GCTGAACGGG CAGGTTCTGC ACAGGTTATC GTTACCCCTA AAACTTTAGG ATTGACTAAT
CCTGAGTTTT ACATCAAATC ACCAAGTGCT AACACTTACG AATTGTGGAT GAAAAGACTA
ACTGATTTTT CATCACCAGT GACAGTAGTT AGAAAGTCAC GCTCTCGTTA TTCTGCAACG
GTCGCAGGAA TTCTAAGCAT AACAAACACG GCTCCCACAG GCATCACATT GGTACCCTAC
GACACAGGCT ACCAATTCGC CGCTATTCCA ATCGGCATGG AAGTGGCGTT TGACACGCCG
CCGCCGACCA ATGACCCGCG ATTTCGCTTT GTTAAACTGA CGTATAACGA TGCTTACAAC
ACAGGTTTGC TAACATCACA AACGCTTTCT GGTAGTGCAC CAGAACTAGT TTCGACCGCT
GTAATTTCAG CAGCGCAGAG TCCAATAAAC GGGCAAACTA TTTATCTTAA GAACACAATG
GGGGTATATG CGGTACCTGC CGCAACGCAA GAAATAATTG CACAAAACAT ACCACAGCCA
GCAAGGTACA GGATAGATAG CATAAGTCCT GGAGTTAGCT TGCAAACTGG CCCAAGCATC
AGCGGCTTTA TCATAAGTAG TGCATCACAG GAGGCTCAGG TCACAGGGGG GTTAAAGCCA
CGCAGTTTCG GCGCAGTCTT ATACAAGAGG ATTTACTAA
 
Protein sequence
MHKLQNGSQV SVRPQRKPLV GLGGYFSESN DQGAPSYPGQ DWFNDCTDEF INALDEMGIT 
YDQEQLDHLA RAFAAVRSQE WNANVNYGIG QEVVRNNLRY IARAASGPDN GGAITPENNS
GSTWDLVLPQ AYSTTDTQTD WLRLALVVGD NNGAGDFLSL EVIGGSDFGV NTRFSADIMI
AERAGSAQVI VTPKTLGLTN PEFYIKSPSA NTYELWMKRL TDFSSPVTVV RKSRSRYSAT
VAGILSITNT APTGITLVPY DTGYQFAAIP IGMEVAFDTP PPTNDPRFRF VKLTYNDAYN
TGLLTSQTLS GSAPELVSTA VISAAQSPIN GQTIYLKNTM GVYAVPAATQ EIIAQNIPQP
ARYRIDSISP GVSLQTGPSI SGFIISSASQ EAQVTGGLKP RSFGAVLYKR IY