Gene VC0395_A0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0696 
Symbol 
ID5137555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp719237 
End bp720304 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content54% 
IMG OID640532154 
Producthypothetical protein 
Protein accessionYP_001216646 
Protein GI147675708 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTATA GCACTCCAAC GCTACGACAA CTGATTGAGA CGGGTTTAAT CGACATTGAA 
ACCTCGTTAG ATCAGGTGCT GCCAAAATTC GGCGTTGAGC AAGCGCTCAA CGTGGCCGTC
AGTGGCGCGA TTCGTGACCT CTATGATTAC AATAGCTGGA TTGTTCGCCA AATTATTCCA
ACGTCAGAGA GCGACGACCA AACCATTATT GATACTGCTC GCACCGAGGG TGTGATCCGC
AAACTGGCCT CTGCTTCGGC AGGGCCTGTC ACTTTCACAG GCAATGCACC CATTCCGGTT
TCCACTGTGA TGACGCATCA AGATGGGCGC TCATATCGAG TGACCTCATC GGCTGCGCCA
TCCGGTGGCT CTGTGGTGGT GCAAATCCAA GCCGAAGAGA CGGGCGCGAG TTACGACTTA
CCAGCAGGCC AACAACTTAC CCTTGCGCAA ACTGTCCCAG GTGTTCAGCC TGTCGGCCTT
ACAGGTGATA TTTCAGGCGG TGCCGATATT GAGCCTGTCT CTCAAGTGCT AGAGCGCTTG
CTGTTTCGCA AGCGTAATCC GCCAATGGGT GGCGCTCCGC ATGACTATGT GGCGTGGTGC
CGCGAAGTCG CAGGCGTTAC GCGCGCGTGG GCGGTAGATT TTTACCAAGG CCCATCAACG
GTTGGTTATG CGTTCGTGTT TGATAATCGC GCTAGCATTT TGCCTACCGT GACCGATAAG
CAAGCCATGC AGCAATACAT CTATCGTCAC TCCGATCCTG CAACCGGAAC GGATGTTGGT
CGTCCGGCTG GCATTGAAGC GATTGATATT CCTCTTACGC TCAAAGTCAC CAATCTAAGC
ATTCAGTTGA CACCAGATAC CGAAGAGAAC CGCACCGCTG TACAAACTAA CCTCGATGCT
TACTGGCGAA CTTTATCGCC TGGTTCAACC TTGGTGCTCA GCAAAGTGCG CACGGCCATT
GGTGAAGTCG ATTCAGTGAG TGACTATATT CTCGATTTGT CTGCCGACGT GCCATCGGCC
GCCGAAGAGC TGCACGCGCT AGGAGTGATC ACATGGGCCA CTCTGTAG
 
Protein sequence
MPYSTPTLRQ LIETGLIDIE TSLDQVLPKF GVEQALNVAV SGAIRDLYDY NSWIVRQIIP 
TSESDDQTII DTARTEGVIR KLASASAGPV TFTGNAPIPV STVMTHQDGR SYRVTSSAAP
SGGSVVVQIQ AEETGASYDL PAGQQLTLAQ TVPGVQPVGL TGDISGGADI EPVSQVLERL
LFRKRNPPMG GAPHDYVAWC REVAGVTRAW AVDFYQGPST VGYAFVFDNR ASILPTVTDK
QAMQQYIYRH SDPATGTDVG RPAGIEAIDI PLTLKVTNLS IQLTPDTEEN RTAVQTNLDA
YWRTLSPGST LVLSKVRTAI GEVDSVSDYI LDLSADVPSA AEELHALGVI TWATL