Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0673 |
Symbol | |
ID | 5135776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 701512 |
End bp | 703077 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640532131 |
Product | portal protein |
Protein accession | YP_001216623 |
Protein GI | 147675070 |
COG category | [R] General function prediction only |
COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATG AATTCCGCGA ACAAGATGTG CTGCTGCCTT ACCAGAAGCG ATGGATTGCT GATGAATCTC CGCTAAAGAT TGCGGAGAAA AGCCGCCGGA CGGGTATTAC TTGGGCGGAA GCGGCCGATG CTGCGCTCAC GGCTTCTAAG TCAAAGGCCG CAGGTGGCAC TCACCATTTC TATGTGGGTT CCAACAAAGA GATGGCGCGC GAATTCATTG ATGCGGTAGC GATGTGGGCC AAGGCGTTTA ACTATGCGGC GCAAGATGTT CAGGAAGAAG TCTTTCTCGA TGACGATGGC AACAAAGAAA TCTTAACCTT TGTGGTCTAT TTCGCTTCTG GCTTTAAGGT GCAAGCGTTA TCCAGCAACC CTTCTAACCT GCGGGGTATG CAGGGCTGCG TAACCATTGA CGAAGCCGCA TTCCATGAAC GGCTTGCAGA AGTGCTCAAG GCCGCGTTGG CTTTAACCAT GTGGGGCGCA AAGGTGCGCC TTATCTCTAC CCATAACGGG GTGGACAACC TATTTAACCA GCTCATTCAA GACAGCCGCG CAGGCAAGAA GCGTTACTCG ATCCATACCA TCACGTTGGA TGATGCCTGC CGCGATGGTC TGTATAAGCG TATCTGTCAG GTCAAAGGCA AAACATGGAC GCAAGAAGCC GAAGACCAAT GGAAGCGTGA CCTACTGCGT GACACCGCCA CCGAAGAAGA TGCGCTGGAA GAATACTACT GTGTGCCGAA GAACGGCGGC GGCGCATACA TTAGCCGTGG TCTTCGTGAG CGTGCGGCCT CTTTGGCTGA TGCGCCCGTA ATCAGCTTTA CTGGCAGCGC AGCATTCAAC AATGCAGGCG AAGCCGAGCG CATGCGTACT ATGCAAGAGT GGCTAGTGGA GAACGTTGGC CCACAACTGC AAGCCTTGCC TAAAGGGTTG CGCCATGCAC TCGGTGAAGA CTTTGCCCGT AACGGTGACT TAACGTCGTT TGCTCCGATT ACCGTCGAGA CAGATACCAA GCGAACGGTT CCGTTCCTAG TCGAGCTTAA GAACGTGCCA TTCAAGCAGC AAGAGCAAGC GCTGTACTAC ATCTGCGATC GCCTGCCTCG CCGCGACGGC ATCAAGCTCG ATGCGCGTGG TAACGGCCAA TACCTTGCCG AGCAGGCCCG ATACCGTTAT GGCGCGGAAG TTGAAGAGGT CATACTCTCT GTCGCCTACT ACCGTGAGAA CATGCCGAAG TTCAAAGCCG CTTTCGAAGA TGACGAAATA AAGCTGCCTA AGCATGAGGA TGTGATCACC GACCTTGGGC AAATCAAAAT CTATCGTGGT GTGCCTGGCA TCGATGACAG CCGAACCAAA GGCAGCGATG GTAACAAGCG CCACGGTGAT AGCGCGGTGG CTATCTTCCT TGCTTATCTC GCTTCTAAAG CCGACATCAC CCGTTACGAA CTGCACACCA TCAAAGCGAA TGCCGATGAA ACACAGCGCC GCTTCTTTGG TACAGCAGAA GAAAACAACC GATTTGACGA CATGCCGCAC GCCAGTGATC TGCGCGGCAA AGGAATTCGA CTATGA
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Protein sequence | MNYEFREQDV LLPYQKRWIA DESPLKIAEK SRRTGITWAE AADAALTASK SKAAGGTHHF YVGSNKEMAR EFIDAVAMWA KAFNYAAQDV QEEVFLDDDG NKEILTFVVY FASGFKVQAL SSNPSNLRGM QGCVTIDEAA FHERLAEVLK AALALTMWGA KVRLISTHNG VDNLFNQLIQ DSRAGKKRYS IHTITLDDAC RDGLYKRICQ VKGKTWTQEA EDQWKRDLLR DTATEEDALE EYYCVPKNGG GAYISRGLRE RAASLADAPV ISFTGSAAFN NAGEAERMRT MQEWLVENVG PQLQALPKGL RHALGEDFAR NGDLTSFAPI TVETDTKRTV PFLVELKNVP FKQQEQALYY ICDRLPRRDG IKLDARGNGQ YLAEQARYRY GAEVEEVILS VAYYRENMPK FKAAFEDDEI KLPKHEDVIT DLGQIKIYRG VPGIDDSRTK GSDGNKRHGD SAVAIFLAYL ASKADITRYE LHTIKANADE TQRRFFGTAE ENNRFDDMPH ASDLRGKGIR L
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