Gene VC0395_A0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0672 
Symbol 
ID5135880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp700930 
End bp701511 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content53% 
IMG OID640532130 
Productprotein gp27 
Protein accessionYP_001216622 
Protein GI147675667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.467358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTG CCAGTAACCG CAAAAGCAAA GTTGAACTGC TGCCGGAAGA TATCCGCAAT 
ACGCTGAATG TCTTTATCCG CAGCGGCAAC ATGACGCAAA AAGACATTCT AGAAGCGGTC 
AATCAAATGA TTGATGACGC AGGCTTGGGA GATGATGCCA AGCTAAGCCG CACAGGGTTT 
AACCGCTATG CCAAGCGCAT GGAAGATATG GGCCAACGCT TGCGCCAGTC TCGTGAAGTC 
GCGGAAGTGT GGGTTTCTAA GCTTGGTGAA GCACCAACCA GTGATGTCGG TAAGCTGCTG 
CAAGAGTTCG TGCGCACTAT GGCGTTTGAT ACCTCCATGA AAATGATGGA GCAATCTGAT 
GGTGAAGATG GCGAAGTGAT CTCACCCAAG GCGCTCGGCC AGTTAGCCTT GGTGGTGCAG 
CGCATCGAAA CCGCCGCCAT GACCAGTATG AAGCGCGAGA AAGAGATTCG CGCCGCGTTC 
GCTGCTGAAG CCGCAGAGGC CGCTGAGAAG ATTGTTAAGC AAGCGGGCAT TTCGGCGGAT 
ACCGCCACCG ATATCAAAAA CCAAATCTTG GGGATCGCGT AA
 
Protein sequence
MQVASNRKSK VELLPEDIRN TLNVFIRSGN MTQKDILEAV NQMIDDAGLG DDAKLSRTGF 
NRYAKRMEDM GQRLRQSREV AEVWVSKLGE APTSDVGKLL QEFVRTMAFD TSMKMMEQSD 
GEDGEVISPK ALGQLALVVQ RIETAAMTSM KREKEIRAAF AAEAAEAAEK IVKQAGISAD 
TATDIKNQIL GIA