Gene VC0395_A0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0642 
Symbol 
ID5135822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp682924 
End bp683490 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID640532100 
Producthypothetical protein 
Protein accessionYP_001216592 
Protein GI147675461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0584042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GACTTATAAC CCTATTCGTT TTGCTCGCGA GCGGACTTGG TTACGCCGCC 
GTCGCTAATG CGGCGCAAGC GGAGCATAAA ACTTTCCAGC GATGGGCAGA ATGGCCAGTT 
GTTGGGCAGG CCACCCTTTC ATGGCTGTGG CTGGATATCT ACTCCTCGCA GTTGCGAGCG 
CCTGATGGCC TGTATCATGA GTCGCAAGAT GTCTCGCCAC ATCCTGTTGC TCTTGAGATC 
CGTTATTTGC GCGATATCAG CAGTAAACAG TTGGTGGATG CTACTGAGGA TCAGTGGCGA 
AAACTGGGAT TCACCGCACC GCAAACCCAA GCGTGGTTGA AGCAACTGCA GCAAATACTG 
CCGGATGTCG CGACGGGAGA TCGCCTAGTG TATGTCTCTG ATGGGCAGCG CGGAGAGTTT 
TTCTTTAGTC GCCAACAACA GACGGAACGT TCGGTAGGCC GCATTGATGA TGAAGCGTTT 
AATGATGCTT TTCTCTCCAT TTGGCTGTCG CCGCAAACGG AATATTTAAC CTTGCGTAAT 
CAATTGATAG GAATGAATCG ACCATGA
 
Protein sequence
MKKGLITLFV LLASGLGYAA VANAAQAEHK TFQRWAEWPV VGQATLSWLW LDIYSSQLRA 
PDGLYHESQD VSPHPVALEI RYLRDISSKQ LVDATEDQWR KLGFTAPQTQ AWLKQLQQIL 
PDVATGDRLV YVSDGQRGEF FFSRQQQTER SVGRIDDEAF NDAFLSIWLS PQTEYLTLRN 
QLIGMNRP