Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0639 |
Symbol | |
ID | 5136688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 680409 |
End bp | 681218 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532097 |
Product | hypothetical protein |
Protein accession | YP_001216589 |
Protein GI | 147673715 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000143987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTGC CCCAAGATAG CACCGAGTGG CAAAGTTGTT TGATGGTTGG ACAAGTCAGA CATCGACGTT TTACGCCGGT CGAGCACGCA CTCAACTATC CGCTGTTTAT GCCTTGTATT GATTTAGATG AATGGCCACA GTTGGCGGAT AAAGTGTGGG GATTGGGTGA GCGTTGGTGG CATTGGGCGC GTTTTCGCCG TGAAGATTAC CTCGGGCAAG GCCCGCTCAA ACAAGCAGTA CTTGATAAGA TCGAGCAACT GACGGGAGAG CGAATAGAAG GCGGCAGAGT GGTGGCTTTG CTGCACCTGC GCTATCTCGG AATCTATTTT AGCCCAGTCA ACTTTTACTA CGTCTATGAT AGCGAAAAGC GTTGGCGTTA TTTGTTGGCT GAAGTCAGCA ATACCCCGTG GAATGAGCGC CACTACTATG CGGTTCCAGC ACAAGCAGCA TTAACCTCAG AAGAGGCTGC CGTGATTGAA TGGCAGCATG CGAAAGCGTT TCATGTTTCG CCATTCAATC CCATCGAACA GAGATACTGC TGGAAAATTA AACCCTTAAC TCGCGCGCTG ATGATCCATC TTGAGTGTCA TCGTAGTAAT AAAGAGTTTG ATGCTACCTT AGCGATGCAG GCTGAACCCT TGAGCGCAAG CAATTTATTA CCTCGATTGA TCAAAACGCC GATCATGGCA GTAAAAGTGG TATTGGGCAT TTATTGGCAC GCTTTCAAAT TGTGGCGCAA AGGTGCCCCG TTTTATGCGC ACCCAGACCA AACTCAGAAC AATAATAAGG AGCAACCTCA TGTTAAATAG
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Protein sequence | MPVPQDSTEW QSCLMVGQVR HRRFTPVEHA LNYPLFMPCI DLDEWPQLAD KVWGLGERWW HWARFRREDY LGQGPLKQAV LDKIEQLTGE RIEGGRVVAL LHLRYLGIYF SPVNFYYVYD SEKRWRYLLA EVSNTPWNER HYYAVPAQAA LTSEEAAVIE WQHAKAFHVS PFNPIEQRYC WKIKPLTRAL MIHLECHRSN KEFDATLAMQ AEPLSASNLL PRLIKTPIMA VKVVLGIYWH AFKLWRKGAP FYAHPDQTQN NNKEQPHVK
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