Gene VC0395_A0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0639 
Symbol 
ID5136688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp680409 
End bp681218 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID640532097 
Producthypothetical protein 
Protein accessionYP_001216589 
Protein GI147673715 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000143987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGC CCCAAGATAG CACCGAGTGG CAAAGTTGTT TGATGGTTGG ACAAGTCAGA 
CATCGACGTT TTACGCCGGT CGAGCACGCA CTCAACTATC CGCTGTTTAT GCCTTGTATT
GATTTAGATG AATGGCCACA GTTGGCGGAT AAAGTGTGGG GATTGGGTGA GCGTTGGTGG
CATTGGGCGC GTTTTCGCCG TGAAGATTAC CTCGGGCAAG GCCCGCTCAA ACAAGCAGTA
CTTGATAAGA TCGAGCAACT GACGGGAGAG CGAATAGAAG GCGGCAGAGT GGTGGCTTTG
CTGCACCTGC GCTATCTCGG AATCTATTTT AGCCCAGTCA ACTTTTACTA CGTCTATGAT
AGCGAAAAGC GTTGGCGTTA TTTGTTGGCT GAAGTCAGCA ATACCCCGTG GAATGAGCGC
CACTACTATG CGGTTCCAGC ACAAGCAGCA TTAACCTCAG AAGAGGCTGC CGTGATTGAA
TGGCAGCATG CGAAAGCGTT TCATGTTTCG CCATTCAATC CCATCGAACA GAGATACTGC
TGGAAAATTA AACCCTTAAC TCGCGCGCTG ATGATCCATC TTGAGTGTCA TCGTAGTAAT
AAAGAGTTTG ATGCTACCTT AGCGATGCAG GCTGAACCCT TGAGCGCAAG CAATTTATTA
CCTCGATTGA TCAAAACGCC GATCATGGCA GTAAAAGTGG TATTGGGCAT TTATTGGCAC
GCTTTCAAAT TGTGGCGCAA AGGTGCCCCG TTTTATGCGC ACCCAGACCA AACTCAGAAC
AATAATAAGG AGCAACCTCA TGTTAAATAG
 
Protein sequence
MPVPQDSTEW QSCLMVGQVR HRRFTPVEHA LNYPLFMPCI DLDEWPQLAD KVWGLGERWW 
HWARFRREDY LGQGPLKQAV LDKIEQLTGE RIEGGRVVAL LHLRYLGIYF SPVNFYYVYD
SEKRWRYLLA EVSNTPWNER HYYAVPAQAA LTSEEAAVIE WQHAKAFHVS PFNPIEQRYC
WKIKPLTRAL MIHLECHRSN KEFDATLAMQ AEPLSASNLL PRLIKTPIMA VKVVLGIYWH
AFKLWRKGAP FYAHPDQTQN NNKEQPHVK