| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0627 |
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| Symbol | |
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| ID | 5137164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 668414 |
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| End bp | 669763 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532085 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001216577 |
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| Protein GI | 147673167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0620237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAATT ACAGCTTAGA TTTTTCCGGC GACGAAGATT TTCGTCCGTT AGCTGCCCGT
ATGCGTCCAC AAACGGTGGA GCAGTATATT GGTCAGCAAC ACATCTTAGG GCCGGGAAAA
CCGCTGCGCC GTGCATTAGA AGCGGGGCAT ATTCACTCGA TGATTCTTTG GGGACCTCCG
GGCACCGGAA AAACCACTTT AGCCGAAGTG GCAGCCAACT ACGCCAATGC GGAAGTGGAA
CGCGTATCGG CAGTGACGTC CGGAGTCAAA GAGATCCGTG CCGCGATCGA AAAAGCGCGT
GAGAACAAAC TCAGTGGTCG ACGCACTATT TTGTTTGTCG ACGAAGTCCA TCGCTTTAAT
AAATCGCAGC AAGATGCGTT TTTGCCGCAT ATTGAAGACG GTACGGTCAC TTTTATTGGC
GCAACCACGG AAAACCCTTC TTTTGAGCTT AATAACGCGC TGCTTTCCCG CGCGCGGGTT
TATAAGCTCA CCTCACTCAA TCAACAAGAA ATTCTGCAAG CTCTGCATCA AGCGATTGCC
GATACTGAAT GCGGGCTTGG CAAAGTGGCG GCGGTATTTG CTGATAATGT TTTAGATCGC
CTAGCCGAAC TGGTCAATGG CGATGCGCGC ATGTCGCTCA ATTATCTTGA GCTGCTGTAC
GACATGGCTC GCGAAGATGA TCAGGGACGC AAGCAGATTG ATCTGCCTTT ATTGGCTGAG
GTCGCTGGTG AAAAAGTGTC GCGCTTTGAT AACAAGGGCG ATATTTGGTA TGACCTGATT
TCCGCTGTAC ACAAGTCGAT TCGAGGTTCT GATCCCGATG CGGCTCTGTA TTGGGCGGCG
CGGATGATTT CCGCAGGCTG TGACCCTTTG TATATCGCGC GCCGTCTGCT CGCGATTGCC
TCTGAAGATG TTGGTAATGC CGACCCGCGG GGCATGCAAG TGGCGCTTTC TGCATGGGAT
TGCTTTACCC GCGTGGGGCC TGCAGAAGGC GAGCGCGCGA TTGCTCAAGC GATTGTCTAC
CTCGCCTGCG CACCGAAAAG CAATGCGGTG TACACCGCGT GGAAACAAGC GCTGTCGGAT
GCGCATAATC TGCCTGAGTT TGAAGTACCG CCGCATCTGC GTAATGCCCC AACGCGATTG
ATGAAAGATC TCGGTTATGG TGAGGAATAC CGTTACGCCC ATGATGAACC GGGCGCTTAT
GCTGCAGGGG AGTGCTATTT CCCACCAGAA ATGAGTGGAA CTCGCTACTA TCAGCCTACT
CAACGCGGGC TAGAAACTAA GATTGCTGAA AAGTTAGCGT ATCTGGCGGA TTTGAACGCA
AAAAGCCCAC AAAAGCGCTA TGAAAAGTAG
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| Protein sequence | MSNYSLDFSG DEDFRPLAAR MRPQTVEQYI GQQHILGPGK PLRRALEAGH IHSMILWGPP
GTGKTTLAEV AANYANAEVE RVSAVTSGVK EIRAAIEKAR ENKLSGRRTI LFVDEVHRFN
KSQQDAFLPH IEDGTVTFIG ATTENPSFEL NNALLSRARV YKLTSLNQQE ILQALHQAIA
DTECGLGKVA AVFADNVLDR LAELVNGDAR MSLNYLELLY DMAREDDQGR KQIDLPLLAE
VAGEKVSRFD NKGDIWYDLI SAVHKSIRGS DPDAALYWAA RMISAGCDPL YIARRLLAIA
SEDVGNADPR GMQVALSAWD CFTRVGPAEG ERAIAQAIVY LACAPKSNAV YTAWKQALSD
AHNLPEFEVP PHLRNAPTRL MKDLGYGEEY RYAHDEPGAY AAGECYFPPE MSGTRYYQPT
QRGLETKIAE KLAYLADLNA KSPQKRYEK
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