| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0620 |
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| Symbol | |
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| ID | 5135885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 662508 |
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| End bp | 663491 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532078 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_001216570 |
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| Protein GI | 147674765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.375886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGTATT TCAACTTCTG TAAGCAGAAA GGAGTATGTA TGTCTGCTTT TGCCTTTTTT
GGCGCTTTGG AGCTTGGCTT GTTGTATGGC TTAGTAGCTT TGGGCGTGTA TTTAACTTTC
CGAGTGCTGG ATTTCCCTGA TTTGAGCGTC GACGGCAGTT TCCCAATGGG CGCTGCGGTG
GCGGCTACTG CGATTGTGGC AGGAATTAAT CCATGGGTGG CGACAGGATT GGCCATTCTT
GCTGGCGCCG CTACCGGTTG GGTCACGGCT TTTCTGAGTG TGCGATGTGG TATCTTGCAT
CTCTTGGCCT CGATTTTGAC CATGATTGCT GCGTTTTCCA TCAACATCCG CATTATGGGA
CGTCCTAATC TGGCCTTATT GGGTGAAGAC ACCATTTTGA CCCCGTTTGA AGCCTTGGGT
GATCCTGTCT TAATTCGTCC TCTCGTTGTC GCAGTATTGG TCGTGATTTC TGCGCTATTG
GTTATTCGAC TGCTCAACAG CGATTTCGGT TTAGGATTGC GAGCCACAGG TGTCAACGCT
CGTATGGTGG CAGCCCAAGG GGCAAGCACC GCGTTTTACA CGTATTTCTG TTTGGCTCTG
TCTAATGGTT TTGTCGGTTT TGCAGGGGCT CTATTTGCGC AAACCAACAG TTTTGCGGAT
GTCACTTCTG GCGTTGGTAC AATTGTGGTG GGGCTTGCTG CGGTTATTTT AGGACAAACC
CTGATCCCCG GTCGCAAGAT CTGGGTCGCT GTCGTGGCGG TCATTGTCGG CTCTGTGCTG
TACCGTTTAG CGGTTGCCTT CGCACTCAGT TCAGGCATGT TTGGCTTACA AGCGTCCGAT
CTTAACTTGG TGACTGCCGT GTTAGTGGCT TTGGCGCTGA TCATGCCGAA GATTAAAAGG
AATTTAAAAT CAAAAAAGCG TAACGCACCT GCTCAGAAGC CCGAAGTCTC TCAGCAGGGA
AGCGTGTCAG GAGATGCAGT ATGA
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| Protein sequence | MGYFNFCKQK GVCMSAFAFF GALELGLLYG LVALGVYLTF RVLDFPDLSV DGSFPMGAAV
AATAIVAGIN PWVATGLAIL AGAATGWVTA FLSVRCGILH LLASILTMIA AFSINIRIMG
RPNLALLGED TILTPFEALG DPVLIRPLVV AVLVVISALL VIRLLNSDFG LGLRATGVNA
RMVAAQGAST AFYTYFCLAL SNGFVGFAGA LFAQTNSFAD VTSGVGTIVV GLAAVILGQT
LIPGRKIWVA VVAVIVGSVL YRLAVAFALS SGMFGLQASD LNLVTAVLVA LALIMPKIKR
NLKSKKRNAP AQKPEVSQQG SVSGDAV
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