Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0603 |
Symbol | |
ID | 5137559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 640715 |
End bp | 642034 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532061 |
Product | sensory box sensor histidine kinase |
Protein accession | YP_001216553 |
Protein GI | 147673721 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA GTCGTTTATT GCTCTCTGAA CTACTGGATC AACTCTCTTT TGCGCTCTGT ATCGTGCGTA ATGACTATGT GATCGTCAAA GTGAATGAAT ATTTTGAATC ACGTGTCATT TTTGATGGGG AAACCATGCA AGGGAAGAAC ATCCTAGAGC TATTTCCTGA ATCCGCCGAT TATTTAAAGC GCAAAATTGA TACGGCGCTG GTGATTGAAT CCTCCAGTTT CAGCAGTTGG GAGCAGAAAC CGCATCTTTT GCCTTTCAAA AGTTCTCGCC CAGTGTCGGG CGAAGAAGAG CAGATGTATC AAAACCTCGA AGTGATCCCG ATCCACAGTG AAGATGGGAC GATAGAGCAT GTCTGTCTCT GTGTGTATGA CGTCACGATT CAAGCGAGCC AGCAACAGGA ACTTAAGCGA GTATCGCAAA AGCTTGAAGA AGAGCATCAA TCCCAAAAAG TGTTAATCAA GAAACTGGAA GATGCACAAG GGCAATTAAT TCAATCGGAA AAAATGGCCT CAATTGGTCA ACTTTCTGCG GGGATCGCCC ATGAAATTAA TAACCCAGTA GGCTTTATTA CCTCGAACCT ACAAACGTTA AGCGACTACT TTAATAGCTT AGAGAAAGTT CTGAAAAGCA TTACCCAGAC GATTGGTCAG AGTAAAGACA CGGCACTCAA TGAAGCTTGT CAGAAGATCC TTAAACAAGG ACAAGTAGAT TTTATTTTGG AAGACACGGC GGAGTTGATT ACCGAATCTC TCGAAGGCTC TTCACGCGTC ATGTCGATTG TAAAAAACCT CAAAGAGTTC TCACACGTTG ACCGTTCAGA GTGGAGTTAC GCCAATCTAG AAAACTGTAT CGAATCGACG TTGAAAATCA TCAATAACGA GATCAAGTAC AACATCACGT TGGAGAAACA CTACGCGGCC AATGTGCCCG ATGTTTTTTG CCAGCCGATG CAGATCAATC AGGTGTTACT CAACATATTG GTGAATGCCA GCCATGCCAT CAAAGGCGAA GGGACGATCA CCATTACCTT ACAATCTGCG GGGGACGACT TTGTTGAAAT ACACATTCGA GACACGGGAT GCGGTATTCC GGAGGAGATC CGCGAGCGTA TTTTTGAACC CTTCTTTACC ACAAAACCTG TCGGTTCGGG GACCGGATTA GGTTTATCTG TCTCCTACGG CATTATCAAT AAGCACAATG GTACGATCAG CGTCACCAGC GAAGTCGGTA AGGGGAGCGA ATTCACCATT CGTTTACCGG TGAATCCCAG TGCCGAAGCG GTAGACAATA CCGATGCCAA AGCGATGTAA
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Protein sequence | MAKSRLLLSE LLDQLSFALC IVRNDYVIVK VNEYFESRVI FDGETMQGKN ILELFPESAD YLKRKIDTAL VIESSSFSSW EQKPHLLPFK SSRPVSGEEE QMYQNLEVIP IHSEDGTIEH VCLCVYDVTI QASQQQELKR VSQKLEEEHQ SQKVLIKKLE DAQGQLIQSE KMASIGQLSA GIAHEINNPV GFITSNLQTL SDYFNSLEKV LKSITQTIGQ SKDTALNEAC QKILKQGQVD FILEDTAELI TESLEGSSRV MSIVKNLKEF SHVDRSEWSY ANLENCIEST LKIINNEIKY NITLEKHYAA NVPDVFCQPM QINQVLLNIL VNASHAIKGE GTITITLQSA GDDFVEIHIR DTGCGIPEEI RERIFEPFFT TKPVGSGTGL GLSVSYGIIN KHNGTISVTS EVGKGSEFTI RLPVNPSAEA VDNTDAKAM
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