| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0589 |
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| Symbol | |
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| ID | 5137581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 628571 |
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| End bp | 629806 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532047 |
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| Product | putative transporter |
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| Protein accession | YP_001216539 |
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| Protein GI | 147675684 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTATGT TGTCCCAACT GAATGCCCAT GTTCGTCAGT ACATGCTCGT GACGTTCAAC
TACTGGAATT TTACTCTGAC TGATGGGGCG CTGCGTATGT TGGTAGTGCT CTATTTCTAT
GATTTAGGCT ATTCCAGCTT AGCTATTGCC TCGCTATTTC TGTTCTATGA ATTTTTTGGT
GTCGTGACCA ACTTAATTGG CGGGTGGCTT GGGGCTCGGC TTGGGCTGAA TCGCACCATG
AACATCGGGC TTGGCTTGCA AATCATCGCA CTTTTGATGC TGGCAGTGCC AGCAAGCTGG
CTGACCATTC CTTGGGTAAT GGCCGCGCAA GCCCTGTCGG GCATCGCGAA AGATCTCAAT
AAGATGAGTG CCAAAAGCGC CATCAAAACC CTAGTGCCAG AAAATGCACA AGGCGCGTTG
TTTAAGTGGA TTGCGATCCT GACGGGGTCA AAGAATGCCT TAAAAGGTGC TGGATTTTTC
TTGGGCGGAG CGTTGTTGTC TTTGATCGGT TTCCAGTACG CAGTGGCTGC CATGGCGGCT
GTGTTGGTAT TGGTTTTCAT TGGCAGCGTA ATGAGTTTGA AATCCGATCT CGGCAAGGCC
AAGAACAAGC CGAAGTTTTC CGATATTTTC TCTAAATCGG CGAGTGTGAA CATCCTGTCG
GCGGCACGGC TATTTCTGTT TGGCGCGCGC GATGTGTGGT TTGTCATCGC ACTGCCTATC
TATTTAGGCA GCGTGTTTGG TTGGGATCAC AGTGCTGTGG GCGGTTTTCT GGCGCTTTGG
GTGATTGGCT ACGGCGTCAT TCAAGGATTC GCGCCCAAAA TCACAGGCAG CAAATCGGAG
CATCCACCAG CAGGGCGAGC CGCTATTGGC TGGGCATTGG CACTGTCTTT GGTCACGGGG
CTGATTGCTT ACGGTGTGCA GATACAGTGG CACCCAGAAG TGGTGATCAT CGGAGGACTC
ATGCTGTTTG GTGCGGTATT TGCGGTGAAC TCTTCACTGC ATTCATACCT GATTGTCAGC
TACGCCAAAG ATGATGGCGT ATCGCTTGAT GTCGGCTTCT ACTACATGGC GAATGCGATG
GGGCGCTTAA TCAGCACGAT ATTATCCGGC TGGGTCTTCC AGCTTTGGGG GCTGGCAGCT
TGTTTGTGGG TCTCTTTCGG ATTTTTAGTG CTGACGACGC TGATCTCATT TTGGCTGCCG
AATCGTGCGT ATACGTCACA AGTGAATTTG AAATAA
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| Protein sequence | MFMLSQLNAH VRQYMLVTFN YWNFTLTDGA LRMLVVLYFY DLGYSSLAIA SLFLFYEFFG
VVTNLIGGWL GARLGLNRTM NIGLGLQIIA LLMLAVPASW LTIPWVMAAQ ALSGIAKDLN
KMSAKSAIKT LVPENAQGAL FKWIAILTGS KNALKGAGFF LGGALLSLIG FQYAVAAMAA
VLVLVFIGSV MSLKSDLGKA KNKPKFSDIF SKSASVNILS AARLFLFGAR DVWFVIALPI
YLGSVFGWDH SAVGGFLALW VIGYGVIQGF APKITGSKSE HPPAGRAAIG WALALSLVTG
LIAYGVQIQW HPEVVIIGGL MLFGAVFAVN SSLHSYLIVS YAKDDGVSLD VGFYYMANAM
GRLISTILSG WVFQLWGLAA CLWVSFGFLV LTTLISFWLP NRAYTSQVNL K
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