| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0587 |
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| Symbol | gap |
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| ID | 5135700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 627020 |
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| End bp | 628021 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532045 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001216537 |
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| Protein GI | 147674514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.682529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTA AAGTCGGAAT TAATGGATTT GGTCGTATTG GGCGTTTGGC TTTAAGAGCT
TCGTTTGATT GGCCTGAGAT TGAGTTTGTA CAGATCAACG ATGTGGCGGG CGATGCTGCA
ACATTGGCAC ACCTTTTGGA GTTCGATTCG GTACAAGGTC GTTGGCACCA TGCTGTGGGT
AGTGAAGCGG ATGCTGTCCT GATCAACGGC AAACGCATTC GCGCAACACA AGAAAAAGCG
ATTGATGCAG TGGATTGGTC GGGCTGTGAT GTGGTGATTG AGGCTACGGG TAAGCACCGT
AAAGGCGAGT TCTTGAACCA GTATTTGGCA CAAGGAGTAA AACGCGTCGT CGTTTCAGCA
CCTGTCAAAG AAGAGGGGAT CGCCAATATC GTGGTCGGGG TGAACGATCA CATCTTCAAC
CCTGAACAAC ATCGTATTGT CACTGCCGCT TCTTGTACCA CTAACTGTAT TGCTCCAGTG
GTGAAAGTAA TCCATGAAAA ACTGGGTATC GCGCAAGCCT CTTTTACTAC CATCCATAAC
CTAACCAATA CGCAAACCAT TTTGGATGCA CCGCATAAAG ATTTACGCCG TGCACGTGCT
TGCGGTATGA GCCTCATCCC CACAACCACC GGCTCTGCTA AAGCGATTAT CGAAATTTTC
CCGGATCTGA AAGGCAAGAT TGATGGACAC GCCGTACGTG TACCGTTGGC GAATGCCTCG
TTAACCGACA TCATTTTTGA TGTGCAGCGT GATACGACGG TGGAAGAGAT CAATCAGCTG
TTAAAACAAG CCTCAGAAAA CGAGCTTAAA GGCATTCTGG GTTTTGAAGA GCGTCCACTG
GTGTCGATTG ATTACCAAGG CGATCAACGT TCAACGATTG TGGATGCGCT CTCCACCATG
GTGGTTGGTA AGCGAATGGT GAAGATCTAC GCTTGGTATG ACAACGAAAT GGGTTACGCC
ACGCGCACCG CAGAATTGGT TCGTAAAGTC GGTTTGGCAT AA
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| Protein sequence | MAIKVGINGF GRIGRLALRA SFDWPEIEFV QINDVAGDAA TLAHLLEFDS VQGRWHHAVG
SEADAVLING KRIRATQEKA IDAVDWSGCD VVIEATGKHR KGEFLNQYLA QGVKRVVVSA
PVKEEGIANI VVGVNDHIFN PEQHRIVTAA SCTTNCIAPV VKVIHEKLGI AQASFTTIHN
LTNTQTILDA PHKDLRRARA CGMSLIPTTT GSAKAIIEIF PDLKGKIDGH AVRVPLANAS
LTDIIFDVQR DTTVEEINQL LKQASENELK GILGFEERPL VSIDYQGDQR STIVDALSTM
VVGKRMVKIY AWYDNEMGYA TRTAELVRKV GLA
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