Gene VC0395_A0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0582 
Symbol 
ID5137595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp622291 
End bp622722 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content46% 
IMG OID640532040 
Productputative lipoprotein 
Protein accessionYP_001216532 
Protein GI147674297 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000375847 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TTCTACTTAT TGTTATCTCT ATCCTGTTTG GTTCTGTACT CGTAGGCTGC 
CAAATGAATG AATCCAACAA GACACAAGAT AAAATCCAAT CGATTACGGG GAGTGTGGCA
TACCGTGAAC GCATTGCGTT GCCGGATAAT GCGGTGGTGA CAGTTTACCT ACAAGACGTT
TCCTTGGCTG ATGCGCCAGC GACGGTTATC GCAAAACAGA ACTTCATCAC TAATGGTATG
CAAGTACCAC TTGAATTCAA CCTAGCGTAT GACAGCCGCA AGATCAAAGC GAGTCACCGT
TACAGTGTGA GTGCGCGTAT CGAAGTCGAC GGTAAGCTAC GTTTCATCAC GGATACTCAT
TACGGTGTGA TCACCGATCC TGAAGCGACT AAACACGTAC CTATGATGCT GATTGGTGTG
CATGGCGAAT AA
 
Protein sequence
MKKVLLIVIS ILFGSVLVGC QMNESNKTQD KIQSITGSVA YRERIALPDN AVVTVYLQDV 
SLADAPATVI AKQNFITNGM QVPLEFNLAY DSRKIKASHR YSVSARIEVD GKLRFITDTH
YGVITDPEAT KHVPMMLIGV HGE