| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0580 |
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| Symbol | |
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| ID | 5136471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 620735 |
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| End bp | 621271 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532038 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001216530 |
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| Protein GI | 147675157 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000015391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAGAA AAACTTTGCC ATTTTGCCTA TGCTTTTGTA GTTTTGTAGA AAAATTTTCT
CTAAAAAAGG CAATTTGTAT GTTGCTCGAC AAAGTTGATC GGCAAATCTT GGCCATTTTG
CAACAAGACT GCACCGTGTC ACTCAATGAA TTAGCCGAAG CGGTCAATTT AACCACAACG
CCTTGCTGGA AGCGTTTGAA AAAAATGGAA GAAGGTGGCG TGATTCGCGA GCGAGTCGCA
CTGCTTGATG CGCAAGCCCT TGACCTCTCT TTCACGGCCT TTGTCATGGT GACGACCAAT
AACCACTCCC ATGAATGGTA CTGCCGCTTT GTGACTGCCG TGGAAGAGTT TCCCGAAGTG
ATGGAGTTTT ATCGCATGGC GGGAGAATAC GATTACATGA TGAAGGTGCA GGTCAAAGAT
ATGCCGTGTT TTGACCGATT CTATAAAAAA CTGGTCAATA GTATCGAAGG GTTGAACAAA
GTGACCTCCA CCTTTGCGAT GGAGTCACTT AAATACACGA CTCAGTTACC GCTCTAA
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| Protein sequence | MERKTLPFCL CFCSFVEKFS LKKAICMLLD KVDRQILAIL QQDCTVSLNE LAEAVNLTTT
PCWKRLKKME EGGVIRERVA LLDAQALDLS FTAFVMVTTN NHSHEWYCRF VTAVEEFPEV
MEFYRMAGEY DYMMKVQVKD MPCFDRFYKK LVNSIEGLNK VTSTFAMESL KYTTQLPL
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