Gene VC0395_A0571 details

Gene Information

• Locus tag: VC0395_A0571
• Symbol: apt
• ID: 5136072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 612850
• End bp: 613395
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640532029
• Product: adenine phosphoribosyltransferase
• Protein accession: YP_001216521
• Protein GI: 147673655
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00000300234
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACTG AAACTCTTTC ACTGATCAAA TCCAGCATCA AAAGTATTCC TGACTACCCG 
AAAAAAGGCA TTCTGTTTCG TGATGTGACC AGCTTGCTGG AAGATGCCCA AGCCTACCAA 
GCGACCATTC AACTTCTGGT TGAAAAGTAC AAAGACATGG GTTTTACCAA GGTTGTGGGC 
ACAGAAGCGC GTGGTTTCTT ATTTGGTGCT CCTCTAGCAC TAGAACTGGG TGTCGGCTTT 
GTGCCTGTGC GTAAGCCGGG TAAATTGCCG CGTCAAACCG TCGCTCAATC TTATGAGCTG 
GAATACGGTA CTGATACGCT CGAAATTCAT GTGGATGCGA TCAAACCGGG CGACAAAGTA 
CTGGTGGTGG ATGACCTGCT GGCGACCGGT GGTACGATTG AAGCGACCAC TAAGCTTATC 
CGTCAATTAG GGGGAGAAGT CGAGCACGCT GCCTTCGTGA TCAACTTGCC AGAAATTGGT 
GGTGATAAGC GCCTTGAAGG GTTAGGCTTG CAGGTTTACA GCATCTGTGA ATTTGAAGGT 
CACTAA 

 

Protein sequence

MTTETLSLIK SSIKSIPDYP KKGILFRDVT SLLEDAQAYQ ATIQLLVEKY KDMGFTKVVG 
TEARGFLFGA PLALELGVGF VPVRKPGKLP RQTVAQSYEL EYGTDTLEIH VDAIKPGDKV 
LVVDDLLATG GTIEATTKLI RQLGGEVEHA AFVINLPEIG GDKRLEGLGL QVYSICEFEG 
H