Gene VC0395_A0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0566 
Symbol 
ID5135334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp609180 
End bp609728 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID640532024 
Producthypothetical protein 
Protein accessionYP_001216516 
Protein GI147674582 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.121072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGC TCGATTTATT GCTCAACCGT CGTTCAATTG CCAAATTGGA TGCGCCAGCA 
CCACAAAATG AGGCATTGGA TAATATTTTG CGCGCGGGTT TACGCGCTCC AGATCATGGT
GCTTTGACTC CATGGCGTTT TGTGGTTGCA CAAGGTGAAG GGTTAGCCAA ACTTGCCGCC
ATTTTAGAGC AAGCGGAGAT TGCCAACGGC AGTGATGAAG CGGTGATCAG TAAAGCGAAA
AATGCGCCTT TTCGCGCACC CATGGTGATC ACAGTGATCG CTAAAGTCAC TCACAGTGAA
AAGATCCCTG CGTTTGAGCA GCATCTATCC GCCGGTTGTG CAGTACAAGC CATGCAAATG
GCGGCCGTAG CACAAGGGTT TCAGGGGATT TGGCGCTCTG GAAGTTGGAT GTTCCATCCG
GTTGTCCGTC GTGCTTTCAA TGTACAAGGC GAAGATCACA TTGTCGGTTT TCTCTATCTT
GGGACTCCCG GGACTACGGC AGCTAAAGTG CCCGAACGTG AGCTTAGCAA GTATGTGGAG
TATCTCTAA
 
Protein sequence
MEALDLLLNR RSIAKLDAPA PQNEALDNIL RAGLRAPDHG ALTPWRFVVA QGEGLAKLAA 
ILEQAEIANG SDEAVISKAK NAPFRAPMVI TVIAKVTHSE KIPAFEQHLS AGCAVQAMQM
AAVAQGFQGI WRSGSWMFHP VVRRAFNVQG EDHIVGFLYL GTPGTTAAKV PERELSKYVE
YL