Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0566 |
Symbol | |
ID | 5135334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 609180 |
End bp | 609728 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532024 |
Product | hypothetical protein |
Protein accession | YP_001216516 |
Protein GI | 147674582 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.121072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGC TCGATTTATT GCTCAACCGT CGTTCAATTG CCAAATTGGA TGCGCCAGCA CCACAAAATG AGGCATTGGA TAATATTTTG CGCGCGGGTT TACGCGCTCC AGATCATGGT GCTTTGACTC CATGGCGTTT TGTGGTTGCA CAAGGTGAAG GGTTAGCCAA ACTTGCCGCC ATTTTAGAGC AAGCGGAGAT TGCCAACGGC AGTGATGAAG CGGTGATCAG TAAAGCGAAA AATGCGCCTT TTCGCGCACC CATGGTGATC ACAGTGATCG CTAAAGTCAC TCACAGTGAA AAGATCCCTG CGTTTGAGCA GCATCTATCC GCCGGTTGTG CAGTACAAGC CATGCAAATG GCGGCCGTAG CACAAGGGTT TCAGGGGATT TGGCGCTCTG GAAGTTGGAT GTTCCATCCG GTTGTCCGTC GTGCTTTCAA TGTACAAGGC GAAGATCACA TTGTCGGTTT TCTCTATCTT GGGACTCCCG GGACTACGGC AGCTAAAGTG CCCGAACGTG AGCTTAGCAA GTATGTGGAG TATCTCTAA
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Protein sequence | MEALDLLLNR RSIAKLDAPA PQNEALDNIL RAGLRAPDHG ALTPWRFVVA QGEGLAKLAA ILEQAEIANG SDEAVISKAK NAPFRAPMVI TVIAKVTHSE KIPAFEQHLS AGCAVQAMQM AAVAQGFQGI WRSGSWMFHP VVRRAFNVQG EDHIVGFLYL GTPGTTAAKV PERELSKYVE YL
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