| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0564 |
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| Symbol | fadI |
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| ID | 5136483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 605473 |
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| End bp | 606927 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532022 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001216514 |
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| Protein GI | 147675487 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.814496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAAAAA TCCTACCAAC ACCGGTTTGC CAGTGTTTTT CATCTCGAAA GGATTGTTTA
AATCACGATT ATTTAAACGG CCGTTTGATT TGTTTAACAT TCTCGTTACA ATGCGCCAGG
TCAGACCTCT TATTCGAAGG AGAAATCATG GGCAAACAAG AAGTCAGGAC TCGTTCTGGA
GAACGAGTGG CGATTGTGGC CGGGCTACGT ACGCCGTTTG CGCGTCAAAG CACCGAGTTT
GGTCAAGTAC CCGCAGTCGA TCTCGGCAAA ATGGTAGTAC AAGAGATGAT GGCTCGCACC
GCTATCGATC CTAAATTAAT TGAGCAAGTG GTGTTTGGCC AAGTGGTACA GATGCCAGAA
GCGCCGAATA TTGCTCGAGA AATTGTACTA GGTACCGGAA TGTCGATTAA CACGGATGCC
TACAGCGTTA CTCGCGCTTG CGCCACCAGT TTTCAAGCCG CCGTCAATGT GGCCGAAAGT
ATCATGGCTG GCAGCATAGA TATTGGTATT GCAGGTGGTG CGGATTCTTC TTCTGTTCTG
CCGATTGGTG TTTCTAAAAA ACTGGCGGCT TCTTTATTAG CCTTGAGTAA AACTAAGACG
GTCGGGCAGA AACTTAAACT GCTCAGTAAC CTCTCTTTTA AAGACTTGAT GCCCGTACCT
CCTGCGGTCG CGGAATATTC AACGGGTCTT TCGATGGGGC AAACTGCTGA GCAGATGGCC
AAAAGCTATG CGATTTCGCG CGCTGAGCAA GATGCGTTAG CACATCGTTC ACATACTTTA
GCGGCTCAAG CATGGACAGA GGGCAAAATT CGCGATGAAG TGATGACGGC TTTTCCTGAG
CCATACAAAA AATGGCTGGA TATGGATAAC AACATTCGCA TGGACTCCAA GCTAGAGAGC
TATGCTAAGT TGCGTCCTGC CTTTGACCGT CAATACGGTT CGGTGACCGC AGCAAACTCA
ACCCCACTGA CGGATGGCGC CGCCGCGATT ATGTTGATGC GTGAAGGTAA AGCGAAAGAG
CTTGGTCTTG AGATCATGGG GTATATCCGC TCTTATGCGT TTGCCGCGAT TGGCGTAGAA
AAAGATATGC TGATGGGGCC TTCTTACGCC ACTCCGATAG CCTTGGATCG CGCAGGCATC
ACCTTAAATG ATCTCACTTT GATTGATATG CACGAAGCCT TTGCCGCGCA AACCTTAGCG
AACTTGAAGA TGTTCGCCAG TGACAAGTTT GCTCAAGAGC AGCTAGGTCG CGCACAAGCG
ATTGGTGAAG TGGATATGAG TAAATTTAAC GTGCTGGGTG GCTCACTGGC TTATGGTCAC
CCATTCGCGG CAACAGGTGC GCGTATGATC ACTCAAACTT TGCGTGAATT AAAACGTCGT
GGCGGTGGTT TAGCCTTAAA TACGGCTTGT GCTGCGGGTG GCTTAGGCGC TGCTATGATT
CTGGAGGTGG AATAA
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| Protein sequence | MQKILPTPVC QCFSSRKDCL NHDYLNGRLI CLTFSLQCAR SDLLFEGEIM GKQEVRTRSG
ERVAIVAGLR TPFARQSTEF GQVPAVDLGK MVVQEMMART AIDPKLIEQV VFGQVVQMPE
APNIAREIVL GTGMSINTDA YSVTRACATS FQAAVNVAES IMAGSIDIGI AGGADSSSVL
PIGVSKKLAA SLLALSKTKT VGQKLKLLSN LSFKDLMPVP PAVAEYSTGL SMGQTAEQMA
KSYAISRAEQ DALAHRSHTL AAQAWTEGKI RDEVMTAFPE PYKKWLDMDN NIRMDSKLES
YAKLRPAFDR QYGSVTAANS TPLTDGAAAI MLMREGKAKE LGLEIMGYIR SYAFAAIGVE
KDMLMGPSYA TPIALDRAGI TLNDLTLIDM HEAFAAQTLA NLKMFASDKF AQEQLGRAQA
IGEVDMSKFN VLGGSLAYGH PFAATGARMI TQTLRELKRR GGGLALNTAC AAGGLGAAMI
LEVE
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