Gene VC0395_A0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0562 
Symbol 
ID5136794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp603802 
End bp604533 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content47% 
IMG OID640532020 
Producthypothetical protein 
Protein accessionYP_001216512 
Protein GI147673825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAC TGGAATTTCG CCGCAAAGTC ATGTCTGATC CTAAACAGCG CGATAACGAC 
ACACTGGATA TGATGACCTC AAGTGAGGCT AACGCTAAGT TTGTCGATGA TGTACTTCAG 
CTCGATAAGC AGATCGCTCA GGCCTTCAAA GTCGATGTGC CGGATGATTT GGCCGATAAA 
ATTTTATTCA AACAAACGAC TTTAGTGGAA GATGAGAAAG TCATCCGCCC GCAGTTTGTT 
CGAAAAGCCA TGGCGATCGC GGCATCGGTT GCCTTTACTG CTGGGCTGCT TGTTGGACAA 
ATCCAGTGGG GCAACCTTTT GATCTCTCCC GCGCAAGCCA GCCTGTCTGA CATGGCGGTG 
CAACATGTCA TCCATGAAGA AGGGTTCGTC AACCGATTGG ATGAACAAGC GGACATGCAG 
CAAATCAATG CCAAGATGCG GCCTTTTGCC TACAAAATGG AAGGCGATTT TCCTTATCAC 
GTCTATTACC TCAACCATTG TGGTTTTGGT AAAGACAATG CCGTACATAT GGTATTTCAA 
GGTGAAAAAG GCAAAGTAAC TCTGTTCTTT ACGCCCATCC ACAGCGCACA AAGCAGCCTA 
TTCAAGCAAG AAGGGATGGC AGGCATCATT GAACCCGTCG GAAATGCCAG TTTGATCTTG 
GTCGGTGAGA AGGATGAAAA CCTGACCAAC ATTGCCAATA AGCTCATGCC CATGATCCAA 
TCATCCATCT GA
 
Protein sequence
MDELEFRRKV MSDPKQRDND TLDMMTSSEA NAKFVDDVLQ LDKQIAQAFK VDVPDDLADK 
ILFKQTTLVE DEKVIRPQFV RKAMAIAASV AFTAGLLVGQ IQWGNLLISP AQASLSDMAV 
QHVIHEEGFV NRLDEQADMQ QINAKMRPFA YKMEGDFPYH VYYLNHCGFG KDNAVHMVFQ 
GEKGKVTLFF TPIHSAQSSL FKQEGMAGII EPVGNASLIL VGEKDENLTN IANKLMPMIQ 
SSI