| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0560 |
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| Symbol | fadL-1 |
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| ID | 5136469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 600655 |
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| End bp | 601953 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532018 |
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| Product | long-chain fatty acid transport protein |
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| Protein accession | YP_001216510 |
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| Protein GI | 147675389 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00871251 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA ATAAGACTCT CCTCTCCTGT GCTGTGGCTT TCGGTTTAGC CAGCGTTTCT
ACCTTTACTC AAGCGGCAGG TTTCCAGCTT GCTGAATATT CAGCAACGGG TCTTGGCCGT
GCTTACGCCG GTGAAGCCGC GATGGCAGAC AATGCCAGCG CACAATGGCG CAACCCTGCA
ATGCTGACCT ATTTAGAGGG CACTCAAGTT TCTGCCGGCG CAATTTACGT GAATCCAAAC
GTGGATGTTG AGGGTACAGT AAACCACGCA CAACTAGGTA AAACTCACGC ATCTTCAAAC
GATTTTGCCC ACGATGCAGT GATTCCGAAT TTCTACCTGT CACACCATTT AAACGAACAA
GTGGCACTGG GTTTTGCTCT TGGTACTAAC TACGGTATGG AAACGGATCT GGGTACTGAG
TTTGCAGCCT CTCACTTTGG CAGCCAAGCG AGCGTGATCA GCAAAGAAGC GAACCTCAAT
ATTGCTTACC AAATCTTGCC TCAATTGAGT ATTGGTGGCG GTGTGCGTTA TGTGATGGGT
GAAGGTCATT TCGGTGCAAC TGCGCCAGCA AAAAATCTGA TTCGTCATCC TATTACTAAC
AACGTCATGA CTTTACCTAA AGGTACAACA TTAAAATATA TGGAAGGTGA AGATAACTCT
TGGGGTTGGC AAGTAGGCAG CGCATGGCAA ATCAATCAAG ATCACCGCGT AGGTTTCGCC
TATAAATCGG AAGTGGTGAT GGATTTTGAA GGCCATGCAG AAGGAGTCAG TTACGGTAGT
TATAAACCCG GCATGATGTC TGTGACTCTA CCGGCGACGG CTGAACTGGC AAGCTTCCAC
CAACTCAATG ACCAGTGGGC GATTCACGCT AGCATTAACT GGACAGATTG GAGTTCATTC
AAAGAGTTGA CAGCTGTGTT CCCAGAAAAA TCTGACCTCA TCAAATCAGA AAACTGGGAA
GACAACTACC GCTTTGCTTT GGGCACAACG TATCAATACG ATGCTAAACT CGCTCTGCGT
GCGGGCGTCG CATACGACAC ATCAGCGGTA GACGATAAAA ACCGCACAGC AACCATCCCG
GAAACAGACC GTACTTGGGT AAGTGTCGGC GGTAGTTATG TTGCAACGCC ACAACTGACT
CTCGATGCCG GTTTTACCTA TATCTTTGCG AAAGATGCCA CCATCAACGA ACCTCGTGAC
GCTTCAGACC AAACTGCAGC CGCAATCGGT GGTGCATTTA CGGGCAATGT ATCAGGCAAT
GTATGGCTGA TCGGTGTTCA AGCGAACTAC CGCTTCTAA
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| Protein sequence | MKTNKTLLSC AVAFGLASVS TFTQAAGFQL AEYSATGLGR AYAGEAAMAD NASAQWRNPA
MLTYLEGTQV SAGAIYVNPN VDVEGTVNHA QLGKTHASSN DFAHDAVIPN FYLSHHLNEQ
VALGFALGTN YGMETDLGTE FAASHFGSQA SVISKEANLN IAYQILPQLS IGGGVRYVMG
EGHFGATAPA KNLIRHPITN NVMTLPKGTT LKYMEGEDNS WGWQVGSAWQ INQDHRVGFA
YKSEVVMDFE GHAEGVSYGS YKPGMMSVTL PATAELASFH QLNDQWAIHA SINWTDWSSF
KELTAVFPEK SDLIKSENWE DNYRFALGTT YQYDAKLALR AGVAYDTSAV DDKNRTATIP
ETDRTWVSVG GSYVATPQLT LDAGFTYIFA KDATINEPRD ASDQTAAAIG GAFTGNVSGN
VWLIGVQANY RF
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