| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0552 |
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| Symbol | udp-1 |
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| ID | 5136352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 591127 |
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| End bp | 591903 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640532010 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_001216502 |
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| Protein GI | 147674560 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGGAGC CCCCTATGAC CAAAACCGTA TTCCACCTTG GTGTGACTGA AGCAGATTTA
AACGGTGCCA CACTCGCTAT TATTCCGGGC GACCCTGCTC GTGTGCAGAA AATCGCGGAG
CTGATGGATA ACCCTGTTTT CCTCGCAAGC CATCGTGAAT ATACCGTATA CCGCGCAGAG
CTGGATGGGC AGTCTGTGGT GGTGTGTTCA ACCGGTATCG GTGGACCTTC AACATCGATT
GCGGTTGAAG AGTTAGCACA ATTAGGCGTG CGTACTTTCT TGCGCGTTGG CACGACTGGT
GCGATCCAGC CTCATGTGAA TGTCGGTGAC ATGATTGTCA CAACCGGTTC TGTGCGTTTG
GATGGTGCAA GTCTGCACTT TGCGCCGATG GAATTCCCAG CGGTACCGGA TTTTGATGTG
GCGACCGCAA TGAAAGCGGC AGCACAAGAA AGCGGTGCAA CAGTCCATAT GGGTGTGACA
GCGTCCTCCG ATACCTTCTA CCCAGGCCAA GAGCGTTACG ACACTTTCAC TGGTCGCGTA
GTGCGTCGTT TCCAAGGCTC GATGAAAGAG TGGCAAGACA TGGGCGTGCT CAACTTTGAA
ATGGAATCGG CAACTCTGCT GACCATGTGC GCGAGCTCTG GTTTGAAAGC GGGCTGCGTG
GCGGGTGTGA TCATCAACCG TACTCAAAAA GAGATCCCAG ATCACGCGAC GTTGAAAGAA
ACCGAAGCGC GTTCTATCAA AGTTGTGGTG GAAGCTGCAC GTAAGATGCT GAAATAA
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| Protein sequence | MKEPPMTKTV FHLGVTEADL NGATLAIIPG DPARVQKIAE LMDNPVFLAS HREYTVYRAE
LDGQSVVVCS TGIGGPSTSI AVEELAQLGV RTFLRVGTTG AIQPHVNVGD MIVTTGSVRL
DGASLHFAPM EFPAVPDFDV ATAMKAAAQE SGATVHMGVT ASSDTFYPGQ ERYDTFTGRV
VRRFQGSMKE WQDMGVLNFE MESATLLTMC ASSGLKAGCV AGVIINRTQK EIPDHATLKE
TEARSIKVVV EAARKMLK
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