| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0549 |
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| Symbol | |
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| ID | 5136931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 586643 |
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| End bp | 587617 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532007 |
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| Product | GGDEF family protein |
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| Protein accession | YP_001216499 |
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| Protein GI | 147673523 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTCTA TTTTTTCCTC GACGATTATT GCCAATCCTG AAATTCTGCA GTTTATTTTT
CAATCGCTGC CTGAACCCAC TTTTCTCATC AATAAGAAAG GGGTGTATAT CGAAGCATGG
GGAGGTACGG ACAGTGAACG CCATCACAAC CCCTCTTATC TGGTCGGTTT AAACCAGTAT
GATGTGTTAC CGGCAGCACA GGCTGCTTGG TTTACTGACG TCATCCAACA AGCGATCGAG
CAGGGCTGTG CCAAAGAGTT GGAATATGAA ATTGATCCAA CCCAGTTGCC CTGTTTTGAC
AATGTCCCTG GGCCAAGCCA AAAGCAGTAT TTCTCCGCAT TAGTCATCCC TCTTCCCAAC
ACAGACATGG TGTTGTGGAC CGTGCGTAAC ATCTCAGACT ACAAGCACAC GGTTGAAAAA
CTCGCGCAGC ATCAGTTGGA ACTTGAGCAC CTGACTCATA TGGATCATCT GACCCAAGTG
TACAACCGTT ACGCAATGGA TTCGTTGCTG CCGCAAGCAC TGGACATCGC CCGACTCGAT
CGGGTCAGCA GCGCATTATT GATGATCGAT ATTGACTGTT TCAAAGAGTA CAACGACGGA
TATGGCCATA TTCAAGGCGA TGATGTCCTG CGCAAGGTCA GCCAAACGCT GCGTCAATGG
AAATCGAATC TCGATCTCTG CTTTCGCTAC GGCGGGGATG AATTTTTGAT TTTTATGACC
AGAGTCGATG CAAAGCAGTG CCAGCAACGA GCCGAAAAAC TGATGGCGAT GATTCATGAG
CTGAACATCC CGCACCTGAG TTCTCGAGTG GCGGATCATG TGACGATTAC CGTAGGCATT
CGCCACTGTG ATCAAATAGA GAAAGAAATG ACCGCGGAAA AGCTTGTGTT AGTCGCCGAT
AAAGCGCTGT TTCATGCCAA ACATGAGCAA CGTGGCACCA TTCATATGTT TAGTAGTACC
ACTTGGCATG AATAG
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| Protein sequence | MTSIFSSTII ANPEILQFIF QSLPEPTFLI NKKGVYIEAW GGTDSERHHN PSYLVGLNQY
DVLPAAQAAW FTDVIQQAIE QGCAKELEYE IDPTQLPCFD NVPGPSQKQY FSALVIPLPN
TDMVLWTVRN ISDYKHTVEK LAQHQLELEH LTHMDHLTQV YNRYAMDSLL PQALDIARLD
RVSSALLMID IDCFKEYNDG YGHIQGDDVL RKVSQTLRQW KSNLDLCFRY GGDEFLIFMT
RVDAKQCQQR AEKLMAMIHE LNIPHLSSRV ADHVTITVGI RHCDQIEKEM TAEKLVLVAD
KALFHAKHEQ RGTIHMFSST TWHE
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