| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0538 |
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| Symbol | |
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| ID | 5136211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 577060 |
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| End bp | 577701 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531996 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001216489 |
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| Protein GI | 147674720 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0335133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTATTGC TTTGGCAAAG CAGGATAATG CCGGGATCGG AAGCAAACAT TTATATAACT
ATGACCGAAT ATCTTTTGTT GTTAATCGGC ACCGTGCTGG TCAATAACTT TGTACTGGTG
AAGTTTTTGG GCTTATGTCC TTTTATGGGC GTATCAAAAA AACTAGAGAC CGCCATTGGC
ATGGGGTTGG CGACGACATT CGTCCTCACC TTAGCTTCGG TGTGCGCTTA TCTGGTGGAA
AGTTACGTGT TACGTCCGCT CGGCATTGAG TATCTGCGCA CCATGAGCTT TATTTTGGTG
ATCGCTGTCG TAGTACAGTT CACCGAAATG GTGGTGCACA AAACCAGTCC GACACTCTAT
CGCCTGCTGG GCATTTTCCT GCCACTCATC ACCACCAACT GTGCGGTATT AGGGGTTGCG
CTGCTCAACA TCAACGAAAA TCACAACTTT ATTCAATCGA TCATTTATGG TTTTGGCGCT
GCTGTTGGCT TCTCGCTGGT GCTCATCTTG TTCGCTTCAA TGCGTGAGCG AATCCATGTA
GCCGATGTCC CCGCTCCCTT TAAGGGCGCA TCCATTGCGA TGATCACCGC AGGTTTAATG
TCTTTGGCCT TTATGGGCTT TACCGGATTG GTGAAACTGT AA
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| Protein sequence | MLLLWQSRIM PGSEANIYIT MTEYLLLLIG TVLVNNFVLV KFLGLCPFMG VSKKLETAIG
MGLATTFVLT LASVCAYLVE SYVLRPLGIE YLRTMSFILV IAVVVQFTEM VVHKTSPTLY
RLLGIFLPLI TTNCAVLGVA LLNINENHNF IQSIIYGFGA AVGFSLVLIL FASMRERIHV
ADVPAPFKGA SIAMITAGLM SLAFMGFTGL VKL
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