| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0533 |
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| Symbol | |
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| ID | 5136953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 571762 |
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| End bp | 572454 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531991 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_001216484 |
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| Protein GI | 147673085 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000076694 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA ACCGAACTCT GATGTTAAAT GGCATGTGGA ACAACAACCC AGCCTTAGTG
CAATTACTGG GATTGTGTCC GCTGCTCGCC GTTTCCTCCA CCGTGACCAA TGCCCTCGGA
TTAGGCATTG CCACGCTTCT TGTTCTCGTC GGCTCGAATG TCACCGTCTC TCTCGTGCGT
GATTATGTGC CGAAAGAAGT CCGAATTCCG GTGTTCGTGA TGATCATCGC TTCGCTGGTG
ACTTGCGTAC AGTTACTGAT GAACGCCTAC GCTTACGGGC TTTATCTCTC GCTCGGCATT
TTTATTCCGC TGATTGTGAC CAACTGCATT ATCATAGGTC GTGCTGAAGC GTTTGCTTCA
AAAAATGATG TGCTCCCAGC CGCGTTAGAC GGATTTTGGA TGGGATTGGG GATGACCTCA
GTACTGGTTG TGCTCGGATC ACTGCGCGAA ATCATCGGCA ATGGCACGCT GTTCGATGGC
GCGGACCTCC TACTCGGAGA ATGGGCTAAA GTTCTACGCA TCGAAGTGTT TCACTTTGAC
AGCGCCTTTT TGCTGGCACT GCTGCCCCCC GGTGCCTTCA TCGGCGTTGG CTTTTTGATC
GCCGCTAAAA GCGTGATTGA TAAACAGATT GCCGCTCGCC AACCAAAACA ACAAAAGCAA
GCCATAGAGC GTGCACGCGT GACCAATGTC TAA
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| Protein sequence | MSENRTLMLN GMWNNNPALV QLLGLCPLLA VSSTVTNALG LGIATLLVLV GSNVTVSLVR
DYVPKEVRIP VFVMIIASLV TCVQLLMNAY AYGLYLSLGI FIPLIVTNCI IIGRAEAFAS
KNDVLPAALD GFWMGLGMTS VLVVLGSLRE IIGNGTLFDG ADLLLGEWAK VLRIEVFHFD
SAFLLALLPP GAFIGVGFLI AAKSVIDKQI AARQPKQQKQ AIERARVTNV
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