| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0529 |
|---|
| Symbol | motY |
|---|
| ID | 5136244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 569104 |
|---|
| End bp | 569988 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640531987 |
|---|
| Product | sodium-type flagellar protein MotY |
|---|
| Protein accession | YP_001216480 |
|---|
| Protein GI | 147674163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000708227 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT GGGTTATCAC AAGTTTGTTT GCCATAAGCA TGTTATCAGC GTCTGTCGCT
TCGGCGTTGG AAGTGCGTTA TGTGGCAACA CCACAACAGT CTACGTGGCA AATGGCAACC
AATACTCCGT TGGAATGCCG CCTTGTGCAC CCGATCCCCA ACTATGGTGA CGCCGAGTTT
TCGTCTCGCG CTGGCAAGAA AATCAATCTC GACTTTGAAT TAAAAATGCG TCGCCCAATG
GGGGATACCC GTAATGTCAG CCTAGTCTCT ATGCCTCCGG TTTGGCGGCC GGGGGAAGGC
GCAGATCGCA TCACGAATCT GCAGTTTTTC AAACAGTTTG ATGGTTATAT TGGTGGACAG
ACCGCGTGGT CGTTACTCAG TGAACTGGAA AAGGGGCGCT ACCCGACCTT CAGTTATCAA
GATTGGCAAA GCCGCGATCA ACGTATTGAG GTTGCGCTCT CTTCAGTGCT GTTTCAGCAA
CCCTACAATG AGTTTAGTGA CTGTATTTCT AAGCTATTGC CTTACAGCTT TGAAGACATC
TCGTTTACGA TTTTACACTA CGACCAAGGC ACCAGTGTTG AGTTGAATAA AGCGTCACAA
AAGCGTTTGG CACAGATCGC TGAATATGTA CGCTATAACC AAGATATTGA TTTAGTGCTG
GTTTCCACCT ATACCGATTC CACGGACACC AATAACAATA GCCAAAATTT GTCGGAACAA
CGGGCTGAGG TACTGCGTGA ATACTTTAAA TCGATCGGGT TGCCGGAAGA TCGTATTCAA
GTGCAGGGCT ATGGCAAACG TCGGCCGATC GCCGATAATG CTTCGCCGAT TGGTAAAGAC
AAAAACCGCC GCGTGGTGAT TTCACTAGGC CGAACTCAGG TGTGA
|
|---|
| Protein sequence | MNKWVITSLF AISMLSASVA SALEVRYVAT PQQSTWQMAT NTPLECRLVH PIPNYGDAEF
SSRAGKKINL DFELKMRRPM GDTRNVSLVS MPPVWRPGEG ADRITNLQFF KQFDGYIGGQ
TAWSLLSELE KGRYPTFSYQ DWQSRDQRIE VALSSVLFQQ PYNEFSDCIS KLLPYSFEDI
SFTILHYDQG TSVELNKASQ KRLAQIAEYV RYNQDIDLVL VSTYTDSTDT NNNSQNLSEQ
RAEVLREYFK SIGLPEDRIQ VQGYGKRRPI ADNASPIGKD KNRRVVISLG RTQV
|
|---|
| |