| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0525 |
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| Symbol | purF |
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| ID | 5136658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 565089 |
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| End bp | 566603 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531983 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001216476 |
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| Protein GI | 147673131 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00168895 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TTGTTGGAAT CGTGGGTACA ACGCCTGTAA ACCAGTCAAT TTATGACGCT
TTGACGGTCT TGCAGCATCG TGGCCAAGAT GCCGCGGGTA TTTGTACCAT AGAAAGCAAT
CGTTTTCGTC TGCGTAAGGC AAACGGATTA GTCAGGGATG TCTTTGAAGC GAAACACATG
CAACGCCTGC AAGGCAACGT CGGGATCGGC CATGTGCGTT ACCCCACCGC AGGTAGCTCT
AGCGCCTCAG AAGCTCAACC TTTCTATGTC AACTCTCCTT TCGGTATCAC ACTTGCTCAC
AACGGTAATC TGACCAACGC GAACCAAGTG CGTCAAAAGC TGTTTGAAAA AGACCGTCGT
CATGTGAATA CCACTTCGGA TTCAGAGGTG TTGCTCAATG TCCTGGCTCA TGAAATTGAT
ACCGTAAAGG GCAATGTCAC CGCCGAAGAT GTGTTCCGTG CAATCAGCAA TGTTCACCGT
ACCATTCGTG GTGCTTATGC GGTGGCGGCG ATGATCATTG GTCACGGTAT GATTGCGTTT
CGTGACCCAC ACGGTATTCG CCCATTGTGT CTCGGTAAGC GTGAAGTTAA TGGTCAGCTC
GAATATATGG TCGCCTCCGA ATCGGTCGCA CTGGATGCGG TTGGGTTCGA CTTCGTGCGA
GATGTCGCGC CCGGTGAAGC GATTTATGCC ACTTTCGACG GTGAGCTCTA CACCAAACAG
TGTGCCGATA ATCCAGCACT CAACCCATGC ATCTTTGAAT TTGTCTACTT TGCGCGCCCA
GATTCGTTTA TCGACAAGAT TTCCGTTTAC AGCGCTCGTG TAGAGATGGG TAAGCGTTTA
GGTGAGCGCA TCAAAAACGA TTACAGCGAT CTCGATATCG ATGTAGTCAT CCCGATTCCT
GAAACCTCTT GTGATATCGC CCTACAAATT GCACAGGCGA TTGATAAACC ATATCGCCAA
GGCTTTGTTA AAAACCGCTA TGTTGGTCGA ACCTTTATCA TGCCGGGTCA GCAGCAACGT
AAGAAATCGG TACGCCGCAA ACTCAATGCG ATTCGCTCAG AGTTTAAAGA TAAAAACGTA
CTACTGGTGG ATGATTCTAT CGTGCGTGGC ACTACCTCAG AGCAGATCAT TGAGATGGCT
CGTGATTCTG GGGCGAAGAA AGTCTACATC GTCTCTGCTG CCCCTGAGAT TCGCTTCCCG
AACGTGTATG GTATTGATAT GCCAAGTGCC AATGAGCTGA TTGCTCATGG TCGTGATAAC
GATGCTATCT GTAAGCAGAT TGGTGCTGAT GCCTTGATAT TCCAAACTTT AGAGGATTTG
GTGGAAGCGG TTCGCTGTGG CAACCCTGAT ATCGTCAAGT TTGAAGCTTC GGTCTTTAAT
GGCGAATACG TGACGGGTGA CATCGATCAG CAGTACTTAG ATTTTCTCGA GTCAATGCGC
AGTGATGACG CGAAAGTGCA GCGTGAAATT CAACAAGATC TGGCTAACCT TGAGCTGCAT
AACGAAGGTG CTTAA
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| Protein sequence | MCGIVGIVGT TPVNQSIYDA LTVLQHRGQD AAGICTIESN RFRLRKANGL VRDVFEAKHM
QRLQGNVGIG HVRYPTAGSS SASEAQPFYV NSPFGITLAH NGNLTNANQV RQKLFEKDRR
HVNTTSDSEV LLNVLAHEID TVKGNVTAED VFRAISNVHR TIRGAYAVAA MIIGHGMIAF
RDPHGIRPLC LGKREVNGQL EYMVASESVA LDAVGFDFVR DVAPGEAIYA TFDGELYTKQ
CADNPALNPC IFEFVYFARP DSFIDKISVY SARVEMGKRL GERIKNDYSD LDIDVVIPIP
ETSCDIALQI AQAIDKPYRQ GFVKNRYVGR TFIMPGQQQR KKSVRRKLNA IRSEFKDKNV
LLVDDSIVRG TTSEQIIEMA RDSGAKKVYI VSAAPEIRFP NVYGIDMPSA NELIAHGRDN
DAICKQIGAD ALIFQTLEDL VEAVRCGNPD IVKFEASVFN GEYVTGDIDQ QYLDFLESMR
SDDAKVQREI QQDLANLELH NEGA
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