Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0523 |
Symbol | dedD |
ID | 5135231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 563906 |
End bp | 564502 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531981 |
Product | dedD protein |
Protein accession | YP_001216474 |
Protein GI | 147675233 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0155221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTA AATTTCAAAG CCGTTTAGTT GGCACCATAG TGTTGGTCGC CATCGGCGTG ATTGTGCTGC CCGATGTGCT TGATGGTAAG AAAACGCATT TTAAAGAAGA GATTGCCAGC GTCCCAATTA AACCGCAGCC GGAAGGCGAG GTAGAAAAGT TTGAAGTGCT GGATCCGGTG CAAGATGATA TTGCCTTACC TGAAGCGCCG GTTTCCGTCA CTCAGACGGG GCAGGATAAT CAAGCCAGTG TTGCACCAGT AACGCCGACG GTGGTGAAAA ACAGTGCGCC AGTCAAAGTG GCAGCAGAGC AGCCTGTGCC CGTGACGGTC ACTGAGGTTC CAGAAACGAA TGAATACCAA GATTCCGCGT GGATCATTCA GTTAGTGGCA CTGAAAAATG CCGATAATGC ACGCAATCTC GTGGCTGACT TACAAAAGCG TGGTTACCAA GCGCATGTCA AACAAGAGAA TGATTTCACC CGAGTGATTA TTGGTCCTGA TGTTTCAAAA TCTAAGTTAG AAACCCAACT CGTGGAATTG GAAAAAATTA CCGGTGCTAA AGGTCAATTG CTCAAATTTA AACCACTAAA CCCATAA
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Protein sequence | MASKFQSRLV GTIVLVAIGV IVLPDVLDGK KTHFKEEIAS VPIKPQPEGE VEKFEVLDPV QDDIALPEAP VSVTQTGQDN QASVAPVTPT VVKNSAPVKV AAEQPVPVTV TEVPETNEYQ DSAWIIQLVA LKNADNARNL VADLQKRGYQ AHVKQENDFT RVIIGPDVSK SKLETQLVEL EKITGAKGQL LKFKPLNP
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