Gene VC0395_A0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0523 
SymboldedD 
ID5135231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp563906 
End bp564502 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID640531981 
ProductdedD protein 
Protein accessionYP_001216474 
Protein GI147675233 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0155221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA AATTTCAAAG CCGTTTAGTT GGCACCATAG TGTTGGTCGC CATCGGCGTG 
ATTGTGCTGC CCGATGTGCT TGATGGTAAG AAAACGCATT TTAAAGAAGA GATTGCCAGC 
GTCCCAATTA AACCGCAGCC GGAAGGCGAG GTAGAAAAGT TTGAAGTGCT GGATCCGGTG 
CAAGATGATA TTGCCTTACC TGAAGCGCCG GTTTCCGTCA CTCAGACGGG GCAGGATAAT 
CAAGCCAGTG TTGCACCAGT AACGCCGACG GTGGTGAAAA ACAGTGCGCC AGTCAAAGTG 
GCAGCAGAGC AGCCTGTGCC CGTGACGGTC ACTGAGGTTC CAGAAACGAA TGAATACCAA 
GATTCCGCGT GGATCATTCA GTTAGTGGCA CTGAAAAATG CCGATAATGC ACGCAATCTC 
GTGGCTGACT TACAAAAGCG TGGTTACCAA GCGCATGTCA AACAAGAGAA TGATTTCACC 
CGAGTGATTA TTGGTCCTGA TGTTTCAAAA TCTAAGTTAG AAACCCAACT CGTGGAATTG 
GAAAAAATTA CCGGTGCTAA AGGTCAATTG CTCAAATTTA AACCACTAAA CCCATAA
 
Protein sequence
MASKFQSRLV GTIVLVAIGV IVLPDVLDGK KTHFKEEIAS VPIKPQPEGE VEKFEVLDPV 
QDDIALPEAP VSVTQTGQDN QASVAPVTPT VVKNSAPVKV AAEQPVPVTV TEVPETNEYQ 
DSAWIIQLVA LKNADNARNL VADLQKRGYQ AHVKQENDFT RVIIGPDVSK SKLETQLVEL 
EKITGAKGQL LKFKPLNP