| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0520 |
|---|
| Symbol | truA |
|---|
| ID | 5136298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 560701 |
|---|
| End bp | 561495 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640531978 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_001216471 |
|---|
| Protein GI | 147674772 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG CGTTAGGTAT TGAGTATGAC GGGACTCACT ACTACGGTTG GCAGCGCCAG
AGAGAAGTCA AAAGTGTCCA AGAAGCGTTA GAAAAGGCGC TGAGTAAGAT TGCCAATCAT
CCAGTGGAAG TGCAGTGTGC TGGGCGAACT GATGCGGGGG TACATGGTAC TGGGCAAGTG
GTGCACTTTG ATACCACCGC CGAACGGCAG ATGGTCGCTT GGACCATGGG CGCCAACGCG
AATTTGCCGA AGGATATTGC AGTACGCTGG GCGATGGCGG TTCCTGATGA ATTTCATGCA
CGATTCAGTG CCACTGCACG CCGTTATCGT TATGTCATTT ACAACCATGT TTATCGCCCG
GGGATTTTGA ATTCTGGTGT CAGCCATTAC CACGGCGAGC TGGATGTTGA AAAAATGCAG
CAAGCAGGGC AGTACTTGCT GGGGGAAAAT GATTTCACCT CATTTCGTGC GGTGCATTGT
CAGTCCCGTA GTCCTTGGCG TAACGTCATG CATCTGAATG TGACGCGTCA CGGTCGTTAT
GTGGTGATTG ATATTAAAGC CAATGCGTTC GTGCATCATA TGGTACGCAA TATCACGGGT
AGCTTGATAG CCGTCGGGCG TGGTGAGCAG AAGCCAGAGT GGATTCAATG GTTATTGGCA
CAAAAAGATC GCACCTTAGC GGCGGCGACG GCCAAAGCGG AGGGGCTCTA CTTGGTTTCT
GTTGATTACC CTGCGCATTT TGGGTTGCCC GAAATGCCAA TTGGGCCACT TTTCTTGCCT
GATAATTTGA ACTAA
|
|---|
| Protein sequence | MRIALGIEYD GTHYYGWQRQ REVKSVQEAL EKALSKIANH PVEVQCAGRT DAGVHGTGQV
VHFDTTAERQ MVAWTMGANA NLPKDIAVRW AMAVPDEFHA RFSATARRYR YVIYNHVYRP
GILNSGVSHY HGELDVEKMQ QAGQYLLGEN DFTSFRAVHC QSRSPWRNVM HLNVTRHGRY
VVIDIKANAF VHHMVRNITG SLIAVGRGEQ KPEWIQWLLA QKDRTLAAAT AKAEGLYLVS
VDYPAHFGLP EMPIGPLFLP DNLN
|
|---|
| |