| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0517 |
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| Symbol | glnS |
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| ID | 5136259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 553879 |
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| End bp | 555549 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531975 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_001216468 |
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| Protein GI | 147674963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG CTGAGGCTCG TCCATCGAAC TTCATCCGCC AAATTATCGA TAAAGATCTT
GCGGATGGTA AACACACGAC CGTGCATACT CGTTTCCCGC CGGAGCCGAA TGGCTACCTG
CACATCGGTC ACGCCAAGTC AATCTGTCTG AATTTCGGTA TTGCTCAGGA TTATCAAGGG
CAGTGCAACC TGCGCTTTGA TGATACAAAC CCAGAAAAAG AGAACCTTGA ATATGTTGAG
TCGATCAAAA AAGATGTGAC TTGGCTAGGT TTTGATTGGT CAGGTGAGGT GTGTTACTCC
TCTGACTATT TTGACAAGTT GTATGAATAC GCGATTGAGC TGATTCAAAA AGGCTTGGCG
TATGTGGATG AACTGACGCC TGAGCAAATT CGTGAATACC GTGGCACTCT AACTGAGCCT
GGTAAGCACA GCCCATACCG CGATCGTAGC GTAGAAGAAA ACCTAGCGCT GTTTGAAAAA
ATGCGTGCGG GTGAATTTGC AGAAGGTCAA GCTTGTCTAC GTGCAAAAAT CGATATGGCA
TCGTCTTTTA TCGTAATGCG TGATCCTGTT TTGTACCGTG TGCGTTTTGC TGAACACCAC
CAAACGGGTG ACAAGTGGTG CATCTATCCG ATGTACGATT TCACACACTG TATTTCTGAT
GCGCTCGAAG GCATTACGCA CTCTATTTGT ACTTTGGAAT TCCAAGACAA CCGCCGTCTG
TATGATTGGG TTCTTGATAA CATCACGATT CCATGCCATC CACGCCAGTA TGAATTCAGC
CGCTTAAATC TCGAATATAC CGTGATGTCT AAGCGTAAAC TGAACCAGCT AGTGACCGAA
AAATTGGTCA CAGGTTGGGA TGATCCACGT ATGCCGACCA TTTCAGGCCT GCGTCGCCGT
GGCTTCACGC CAAGCGCTAT TCGTGAATTC TGTAAGCGCA TTGGTGTGAC TAAGCAAGAA
AACATGATTG AATACAGTGC ATTAGAGTCT TGTATTCGTG ATGATCTTAA CGAAAATGCG
CCACGTGCGA TGGCCGTTCT GGATCCGGTT AAACTGGTGA TTGAGAACTT CGCCGCAGGC
ACAGTGGAAA CTTTGACGCT GGCTAACCAT CCGAACAAAC CTGAGATGGG CGATCGCGAA
GTGCCATTTA CCCGTGAGTT GTGGATTGAA CGCGAAGATT TCCGCGAAGA AGCCAACAAG
AAATACAAGC GTTTGGTGTT AGGCAAAGAA GTGCGTCTGC GTGGTGCTTA CGTCATCAAA
GCTGAGCGCA TCGAAAAAGA TGAACAAGGT AATATCACCA CAATCTTCTG TTCTTACGAT
CCTGAAACCT TGGGTAAAAA CCCAGCCGAT GGTCGTAAAG TGAAAGGTGT TATTCACTGG
GTATCTGCAG AAAAAGGCGT TCCTGCTGAG TTTCGTCTCT ACGAGCGTCT GTTCACTGTA
CCCAATCCAG GTGCGGCGGA TAACTTTGCC GAAACCATTA ACCCAGAATC TCTGGTAAAA
GTTCAAGGTT ATGTTGAGCC AAGCTTAGTG GAAGCAAAAC CTGAATTTGG TTATCAGTTT
GAGCGTATGG GCTATTTCTG TGCCGATAAC AAAGACTCTA GCCCGCAGGC TTTGGTCTTT
AACCGCACTG TTGGTTTGCG CGATAGTTTC GTCAAAATTG ACGAAGAGTA A
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| Protein sequence | MSEAEARPSN FIRQIIDKDL ADGKHTTVHT RFPPEPNGYL HIGHAKSICL NFGIAQDYQG
QCNLRFDDTN PEKENLEYVE SIKKDVTWLG FDWSGEVCYS SDYFDKLYEY AIELIQKGLA
YVDELTPEQI REYRGTLTEP GKHSPYRDRS VEENLALFEK MRAGEFAEGQ ACLRAKIDMA
SSFIVMRDPV LYRVRFAEHH QTGDKWCIYP MYDFTHCISD ALEGITHSIC TLEFQDNRRL
YDWVLDNITI PCHPRQYEFS RLNLEYTVMS KRKLNQLVTE KLVTGWDDPR MPTISGLRRR
GFTPSAIREF CKRIGVTKQE NMIEYSALES CIRDDLNENA PRAMAVLDPV KLVIENFAAG
TVETLTLANH PNKPEMGDRE VPFTRELWIE REDFREEANK KYKRLVLGKE VRLRGAYVIK
AERIEKDEQG NITTIFCSYD PETLGKNPAD GRKVKGVIHW VSAEKGVPAE FRLYERLFTV
PNPGAADNFA ETINPESLVK VQGYVEPSLV EAKPEFGYQF ERMGYFCADN KDSSPQALVF
NRTVGLRDSF VKIDEE
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