Gene VC0395_A0515 details

Gene Information

• Locus tag: VC0395_A0515
• Symbol: nagA
• ID: 5135942
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 550455
• End bp: 551591
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640531973
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_001216466
• Protein GI: 147674117
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGCGC TAACGAACTG CAAAATCTAC ACAGGCAATG ATGTGCTTGT GAAACATGCG 
GTAATCATCA ACGGTGACAA AATTGAAGCC GTTTGCCCTA TCGAATCTCT TCCATCTGAG 
ATGAATGTGG TCGACCTAAA CGGTGCAAAC CTCAGCCCTG GTTTTATCGA TTTACAGCTG 
AATGGCTGTG GTGGTGTGAT GTTCAATGAT GAAATCACAG CGGAAACCAT CGATACCATG 
CACAAAGCTA ACCTTAAATC GGGCTGTACC AGCTTCCTTC CAACGCTGAT CACTTCTTCC 
GATGAGAACA TGCGCCAAGC AATTGCCGCC GCTCGCGAAT ATCAGGCTAA ATACCCAAAT 
CAATCGCTTG GTCTTCATTT AGAAGGGCCT TATCTGAATG TCATGAAAAA AGGGATCCAC 
AGCGTTGACT TCATCCGCCC CTCTGACGAT ACGATGATTG ATACGATTTG TGCCAATAGT 
GATGTGATCG CCAAAGTCAC TCTCGCGCCA GAAAATAATA AGCCTGAACA TATTGAGAAG 
CTGGTTAAAG CGGGAATTGT TGTTTCCATT GGACACACAA ACGCGACCTA TAGCGAAGCA 
CGTAAAAGCT TTGAATCCGG CATTACCTTT GCGACCCACC TCTTTAACGC AATGACCCCG 
ATGGTAGGTC GTGAACCAGG AGTGGTCGGG GCGATTTATG ATACACCTGA GGTGTATGCG 
GGCATCATCG CCGATGGCTT CCATGTTGAT TACGCAAACA TCCGAATTGC CCACAAAATT 
AAGGGTGAAA AGCTCGTATT AGTGACCGAT GCCACAGCTC CTGCAGGCGC TGAAATGGAT 
TACTTTATTT TTGTCGGTAA GAAAGTATAT TACCGAGATG GCAAATGTGT TGATGAAAAT 
GGCACGCTTG GCGGTTCAGC CCTAACAATG ATTGAAGCAG TTCAAAATAC GGTTGAGCAT 
GTCGGTATCG CTTTAGATGA AGCTCTGCGA ATGGCTACTC TGTATCCAGC GAAAGCAATC 
GGTGTTGATG AGAAACTCGG TCGTATCAAG AAAGGTATGA TCGCCAACCT GACTGTTTTT 
GATCGTGACT TCAACGTAAA AGCGACGGTA GTTAACGGAC AATACGAGCA GAATTGA 

 

Protein sequence

MYALTNCKIY TGNDVLVKHA VIINGDKIEA VCPIESLPSE MNVVDLNGAN LSPGFIDLQL 
NGCGGVMFND EITAETIDTM HKANLKSGCT SFLPTLITSS DENMRQAIAA AREYQAKYPN 
QSLGLHLEGP YLNVMKKGIH SVDFIRPSDD TMIDTICANS DVIAKVTLAP ENNKPEHIEK 
LVKAGIVVSI GHTNATYSEA RKSFESGITF ATHLFNAMTP MVGREPGVVG AIYDTPEVYA 
GIIADGFHVD YANIRIAHKI KGEKLVLVTD ATAPAGAEMD YFIFVGKKVY YRDGKCVDEN 
GTLGGSALTM IEAVQNTVEH VGIALDEALR MATLYPAKAI GVDEKLGRIK KGMIANLTVF 
DRDFNVKATV VNGQYEQN