Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0514 |
Symbol | nagC |
ID | 5135116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 549238 |
End bp | 550452 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531972 |
Product | N-acetylglucosamine repressor |
Protein accession | YP_001216465 |
Protein GI | 147673497 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGCG GACAGATTGG TAACGTAGAT TTAGTTAAAC AGCTAAACAG TGCGGCGGTT TACCGCTTGA TTGACCAACA AGGCCCAATC AGTCGGATTC AAGTCGCTGA TGTAAGCCAA CTGGCTCCGG CCAGTGTTAC CAAGATTACC CGCCAATTGC TTGAACGTGG ATTAATCAAA GAAGTCGCGC AACAAGCTTC TACAGGTGGT CGGCGAGCCA TTTCGCTGAC CACAGAAGTC AAGCCGTTCC ACTCTATTGC CGTGCGTATC GGACGTGACT ATATTCAACT CAGCCTCTAT GACCTAGGTG GAAACTCACT GGTTGATGAG CATCATGAAT TTCACTACAA CACGCAAGAC GTGTTGATGT CGAGCCTGAT TAAACAGATC AAACAATTTA TTCAACAACA CACCGCATTA ATTGATCAGT TGATTGCGAT TGGTGTGGCC TTACCCGGTT TGGTGAACCC AGAAACAGGT GTTGTTGAGT ACATGCCTAA TGTCGCGATC AATGAATTAC CTCTCGGCGC AACCATTCGT GATGAGTTCC ATGTTGAATG TTTTGTGGGT AACGACGTTC GTGGTATTGC CTTAGCGGAG CACTATTTCG GAGCAAGCCA AGATTGCCAA GACTCCATAC TAGTCAGTGT ACACCGTGGC ACAGGTGCAG GGATTATCGT TAACGGTCAA GTCTTCTTAG GCTATAACCG CAACGTCGGT GAAATTGGCC ACATCCAAAT CGACCCTCTT GGTGAGCAAT GTCAATGTGG CAACTTTGGT TGTCTAGAAA CCGTTGCGAC CAACCCTGCT ATCACTTCTC GTGTGCAAAA ACTGATCGCT CAGGGGTATG AATCTTCGCT CTCTACTCTC GATACGATTA CGATTGATGA TGTCTGTGAG CACGCAAATG CTGGGGATGA ACTGGCGAAA CAAGCGTTGG TTCGTGTAGG TAATCAGTTG GGTAAGGCGA TTGCGATTAC CGTAAACCTA TTCAACCCAC AAAAGATCGT GATTGCTGGG CAAATCACCG CCGCCAAAGA GATCGTGTTC CCCGCGATTC AACGCAACGT AGAAAATCAG TCACTGAAAA CGTTCCACCA ACATCTGCCG ATTGTGTCTT CACAAGTCTA CAAACAACCC ACTATGGGCG CTTTTGCTAT GATCAAACGT GCGATGTTAA ATGGGGTTCT GTTACAAAAA TTGCTTGAAG ACTGA
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Protein sequence | MNGGQIGNVD LVKQLNSAAV YRLIDQQGPI SRIQVADVSQ LAPASVTKIT RQLLERGLIK EVAQQASTGG RRAISLTTEV KPFHSIAVRI GRDYIQLSLY DLGGNSLVDE HHEFHYNTQD VLMSSLIKQI KQFIQQHTAL IDQLIAIGVA LPGLVNPETG VVEYMPNVAI NELPLGATIR DEFHVECFVG NDVRGIALAE HYFGASQDCQ DSILVSVHRG TGAGIIVNGQ VFLGYNRNVG EIGHIQIDPL GEQCQCGNFG CLETVATNPA ITSRVQKLIA QGYESSLSTL DTITIDDVCE HANAGDELAK QALVRVGNQL GKAIAITVNL FNPQKIVIAG QITAAKEIVF PAIQRNVENQ SLKTFHQHLP IVSSQVYKQP TMGAFAMIKR AMLNGVLLQK LLED
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