Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0506 |
Symbol | htpG |
ID | 5135613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 538977 |
End bp | 540884 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531964 |
Product | heat shock protein 90 |
Protein accession | YP_001216457 |
Protein GI | 147674825 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAGA CTGCAACCAC TAATAAAGAA ACGCGTGGTT TTCAATCGGA AGTTAAACAA CTGCTGCACC TGATGATTCA CTCTTTGTAC TCCAACAAAG AAATTTTCCT GCGTGAGTTG ATTTCTAACG CCTCCGATGC CGTTGATAAG TTGCGTTTTC AAGCGCTTTC TCATCCTGAT CTCTATCAGG GCGACGCTGA ATTAGGCGTA AAACTCTCTT TTGATAAAGA CAAAAATACG TTGACCATTT CGGATAACGG GATCGGTATG ACCCGTGATG AAGTGATCGA AAACTTAGGT ACGATTGCTA AATCGGGTAC GGCTGAATTC TTCTCAAAAC TTTCTCAAGA GCAGTCTAAA AACTCGCAGC TCATTGGTCA GTTTGGGGTG GGTTTTTACT CGGCTTTCAT CGTGGCGGAT GCGGTGACGG TGCGGACTCG CGCTGCAGGT AGTGCACCAG CAGATGCAGT ACAGTGGTAC TCAAAAGGTG AGGGCGAGTA CACGGTTGAA ACTATCAATA AAGAGTCTCG TGGTACAGAC ATCATTTTGC ATCTGCGTGA AGAAGGTAAA GAGTTTTTGT CCGAATGGCG TTTGCGCGAT GTGATTTCCA AATACTCTGA TCACATCGGT ATTCCTGTCT ATATCCAAAC CTCAGTGATG GATGAAGAAG GGAAAGCGAC AGAAGAAACC AAATGGGAGC AGATCAACAA GGCTCAAGCT CTGTGGACGC GTGCTAAATC GGAAGTTACC GATGAGGAAT ATAAAGAGTT CTACAAGCAT GTATCACACG ATTTTGCTGA TCCACTCGTG TGGAGTCATA ACAAAGTCGA AGGTAAAAAT GACTACACCA GCTTACTTTA CATTCCTGCT AAAGCGCCTT GGGATCTGTT CAATCGTGAA CATAAGCATG GTTTAAAACT GTATGTGCAA CGCGTCTTTA TTATGGATGA TGCGGCGCAA TTCATGCCTT CTTATCTGAG ATTCGTACGT GGTTTGATTG ACTCAAACGA TCTGCCGCTC AACGTATCGC GTGAAATTCT GCAAGATAAC AAGATCACTC AGTCACTGCG CCAAGCTTGT ACTAAGCGCG TATTGACTAT GCTTGAGCGC ATGGCGAGCA ATGATGCTGA CAATTACCAG AAATTCTGGA AAGAGTTTGG CTTGGTGATG AAAGAAGGTC CGGCAGAAGA TTTTGCTAAC CGCGAGAAAA TCGCTAGCTT GCTGCGTTTT GCCTCTACTC ATATCGATTC GGCAGAGCAA ACCATCAGCC TTGCTTCTTA TGTCGAGCGC ATGAAAGAAG GTCAAGACAA GATCTACTAT CTGACGGCAG ACAGCTATAC CGCTGCGAAA AACAGCCCAC ACTTGGAGCA GTTTAAGTCA AAAGGGATTG AAGTCATTCT GATGTTTGAT CGCATTGACG AATGGTTGAT GAATTATTTG CCAGAGTTTG AGGGTAAAGC GTTCCAGTCC ATCACCAAAG CAGGCTTGGA TCTCAGCCAG TTCGAAGATG AAGCCGAAAA AGAGAAACAT AAAGAGACGG AAGAGCAATT TAAGTCTGTG GTTGAACGCC TCAAAGGCTA TTTAGGTAGC CGAGTGAAAG AGGTTCGTAC CACATTCAAA CTGGCTAACA CACCAGCAGT CGTGGTGACC GATGATTATG AAATGGGTAC CCAAATGGCG AAACTATTGG CCGCAGCCGG CCAGCCTGTG CCTGAAGTGA AGTACATCCT TGAAGTTAAC CCTGAACATG CTTTGGTAAA ACGCATGGCG GATGAAGCGG ATGAGCAAAC TTTTGGCCGT TGGGCGGAAG TGCTACTGGG TCAAGCTATG CTTGCCGAAC GTGGCTCGAT GGAAGATCCA TCACAATTCT TAGGTGCAGT AAACCAACTG CTTGCACCTA GCCACTAA
|
Protein sequence | MSETATTNKE TRGFQSEVKQ LLHLMIHSLY SNKEIFLREL ISNASDAVDK LRFQALSHPD LYQGDAELGV KLSFDKDKNT LTISDNGIGM TRDEVIENLG TIAKSGTAEF FSKLSQEQSK NSQLIGQFGV GFYSAFIVAD AVTVRTRAAG SAPADAVQWY SKGEGEYTVE TINKESRGTD IILHLREEGK EFLSEWRLRD VISKYSDHIG IPVYIQTSVM DEEGKATEET KWEQINKAQA LWTRAKSEVT DEEYKEFYKH VSHDFADPLV WSHNKVEGKN DYTSLLYIPA KAPWDLFNRE HKHGLKLYVQ RVFIMDDAAQ FMPSYLRFVR GLIDSNDLPL NVSREILQDN KITQSLRQAC TKRVLTMLER MASNDADNYQ KFWKEFGLVM KEGPAEDFAN REKIASLLRF ASTHIDSAEQ TISLASYVER MKEGQDKIYY LTADSYTAAK NSPHLEQFKS KGIEVILMFD RIDEWLMNYL PEFEGKAFQS ITKAGLDLSQ FEDEAEKEKH KETEEQFKSV VERLKGYLGS RVKEVRTTFK LANTPAVVVT DDYEMGTQMA KLLAAAGQPV PEVKYILEVN PEHALVKRMA DEADEQTFGR WAEVLLGQAM LAERGSMEDP SQFLGAVNQL LAPSH
|
| |