| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0500 |
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| Symbol | |
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| ID | 5137129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 534172 |
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| End bp | 534999 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531958 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001216451 |
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| Protein GI | 147673313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAT CGATTTTCAT TACTGGCTGC TCAAGCGGCA TTGGTTACAT GGCGGCGAAA
CAATTGCAGT TACGGGGTTA TCAGGTGATA GCATCATGTC GTGATGCACA AGATGTTGCG
CGCCTATCCC AAGAGAGTTT GACCTGCATT CAACTGGATC TCACCTGTGA AGCCAGCATC
AACCAAGCGG TAGAGCAAGC GCTAGAACTT TCCAACCATC GGCTTTATGC ACTGTTTAAT
AACGGAGCTT ATGGCCAACC GGGCGCTTTG GAAGACTTAC CCGTACAAGC TATGCGCGAA
CAGTTCGAAG CCAATTTTTT TGGCTGGCAT CATCTGACGA CCCGCTTGCT TCCTCACTTT
CGTCGTCAAG GTTACGGACG CATTATTCAA AACAGCTCTG TACTTGGCTT TGCCGCCATG
AAATACCGCG GTGCTTACAA TGCTTCCAAG TTTGCCATCG AGGGCTGGAC GGATACCTTA
AGACTGGAGT TGCAAGGGTC GGATATTCAT ATCAGTTTGA TTGAACCTGG TCCGATTGAA
ACTCAATTTC GCGCCAATGC CTTACACGCC TTTAAGCGCT GGGTAAACAT CGAACAAAGT
GTTCACCACC TCGCCTACCA ACAACAAATG CAACGTTTGA GCAAAACGCA CTCCAACAAC
CGCTTTGTCT TACCGCCAGA GGCTTGTCTA GCACCACTTT GCCATGCTCT GGAAGCACGC
AAACCGAAGA TCCGTTATCG CATTACGACG CCAACCAAAG TCTTTGCGGT ATTAAAGCGA
CTTTTACCCA CACGCTGGCT AGACAAATTA TTATTTAAAG CCGCATAA
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| Protein sequence | MTKSIFITGC SSGIGYMAAK QLQLRGYQVI ASCRDAQDVA RLSQESLTCI QLDLTCEASI
NQAVEQALEL SNHRLYALFN NGAYGQPGAL EDLPVQAMRE QFEANFFGWH HLTTRLLPHF
RRQGYGRIIQ NSSVLGFAAM KYRGAYNASK FAIEGWTDTL RLELQGSDIH ISLIEPGPIE
TQFRANALHA FKRWVNIEQS VHHLAYQQQM QRLSKTHSNN RFVLPPEACL APLCHALEAR
KPKIRYRITT PTKVFAVLKR LLPTRWLDKL LFKAA
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